Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01041 ATGGATGTTCACGGAGGAGGGAACAGAGGAGAAGCGGAGCGATGGCTTTACACCGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGTTCATTTGCGATCCGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACGGAGCTCCTTTTAACTGTGATTGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCGCACCACAACCCCTTCGCCTTCGCCGCTCACGCCTTCACTCTCGTCAACGACGCCTGGACCGTACTCTCCAACCCCACTAAAAAGGCCTTCTACGACAACCAACTCAGACTCCTCACTCAACCCGCTCCTCCTCCGGCTCCACCCCCGCCCCCGCCGCCACCACCTCCCGCTCCGGTGACCTTTTTCCCGATTCAGCCGCCGCAACCGAACCTAAATCCGAACCCGCTCCCTCAAAGGGAAAGCCCTAGGCCTAGGGATAGGGTAGAGGTGGAGCCGCCGCCGCCGCCGCCGACGAGTCAGGAGGACAATGCCAGCGAGTTGACTCGGGTGAGTGAGGCCGAGACCGAAGGGGCGAGTTTCTGGACGGCGTGCCCTTACTGTTACGTCATGTACGAGTATCTGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTTGTACGGTCGCCGCCGAAAGATGCTACTTTTGGTTCGTTTTGCAGTTGGGGGTTTTTCCCTCTGGGGTTTTCTGGGGATTTTAAGGACATCAACGGTTCTTCTTCCAAGTGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTCTGAAGGGGGGTGAGGAGAGTAAGAGGTACCAGAAGGGGCCTTGGGTTTTTTACGATGATGACGCCTCTGCGGAGTTCATGGAGGGTGGTTCCGACACGACGGAGGATGATTCCGATGATGCTGACTGGCATGGCGGGAATCAGAAGGGGACCACCAAGAGAAGGAAAAGAAGGAAGAGGAGAAGCAATGTTGGTGGTGGTGATGTTAGAAGGGTGCCTACAATTGAGAGGCCTAGAAGAGGGGTTCATAATGGTGTTGGTAATGACAATCTGGGGAATGGCGAGGCTGTGGATGGTGGTGGTGGTGGTGGCCCCATTGCGGCGGTGCCGGAATCTAGCAAGAAGGCTTCGGCTTTGGGTGGTTCAAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTGTGCATGGAGGGGGTGAAGGGAATGGGAGTGGGAATGCTGAGGATAACATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1488 0.5632 MDVHGGGNRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVNDAWTVLSNPTKKAFYDNQLRLLTQPAPPPAPPPPPPPPPPAPVTFFPIQPPQPNLNPNPLPQRESPRPRDRVEVEPPPPPPTSQEDNASELTRVSEAETEGASFWTACPYCYVMYEYLKVYEDCTLRCQSCRRGFHAVVVRSPPKDATFGSFCSWGFFPLGFSGDFKDINGSSSKWNPFSPLFPCALKGGEESKRYQKGPWVFYDDDASAEFMEGGSDTTEDDSDDADWHGGNQKGTTKRRKRRKRRSNVGGGDVRRVPTIERPRRGVHNGVGNDNLGNGEAVDGGGGGGPIAAVPESSKKASALGGSRRRSERNLGKLDLNVEFSNEVEEPVHGGGEGNGSGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01041 495 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 365 - -
Pumo2g01041 495 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Pumo2g01041 495 MobiDBLite consensus disorder prediction 138 211 - -
Pumo2g01041 495 CDD DnaJ 70 124 IPR001623 -
Pumo2g01041 495 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Pumo2g01041 495 SMART dnaj_3 69 127 IPR001623 -
Pumo2g01041 495 MobiDBLite consensus disorder prediction 329 431 - -
Pumo2g01041 495 Pfam DnaJ domain 70 132 IPR001623 -
Pumo2g01041 495 Gene3D DnaJ domain 65 140 IPR036869 -
Pumo2g01041 495 MobiDBLite consensus disorder prediction 352 366 - -
Pumo2g01041 495 MobiDBLite consensus disorder prediction 140 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01041 Pumo-Chr2 15506885 15508879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01041 11 494 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.046 3.18e-100 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01041 - - gmx:100818960 737.643