Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01030 ATGGATGGTCACGGAGGAGGGAACAGAGGAGAAGCGGAGCGATGGCTTTACACCGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGTTCATTTGCGATCCGGGCCCGAGAGTCCGACCCGAGATACGAGCCCACGGAGCTCCTTTTAACTGTGATTGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCGCACCACAACCCCTTCGCCTTCGCCGCTCACGCCTTCACTCTCGTCAACGACGCCTGGACCGTACTCTCCAACCCCACTAAAAAGGCCTTCTACGACAACCAACTCAGACTCCTCACTCAACCCGCTCCTCCTCCGGCTCCACCCCCGCCCCCGCCGCCACCACCTCCCGCTCCGGTGACCTTTTTCCCGATTCAGCCGCCGCAACCGAACCTAAATCCGAACCCGCTCCCTCAAAGGGAAAGCCCTAGGCCTAGGGATAGGGTAGAGGTGGAGCCGCCGCCGCCGACGAGTCAGGAGGACAATGCCAGCGAGTTGACTCGGGTGAGTGAGGCCGAGACCGAAGGGGCGAGTTTCTGGACGGCGTGCCCTTACTGTTACGTCATGTACGAGTATCTGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTTGTACGGTCGCCGCCGAAAGATGCTACTTTTGGTTCGTTTTGCAGTTGGGGGTTTTTCCCTCTGGGGTTTTCTGGGGATTTTAAGGACATCAACGGTTCTTCTTCCAAGTGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTCTGAAGGGGGGTGAGGAGAGTAAGAGGTACCAGAAGGGGCCTTGGGTTTTTTACGATGATGACGCCTCTGCGGAGTTCATGGACGGTGGTTCCGACACGACGGAGGATGATTCCGATGATGCTGACTGGCATGGCGGGAATCAGAAGGGGACCACCAAGAGAAGGAAAAGAAGGAAGAGGAGAAGCAATGTTGGTGGTGGTGATGTTAGAAGGGTGCCTACAATTGAGAGGCCTAGAAGAGGGGTTCATAATGGTGTTGGTAATGACAATCTGGGGAATGGCGAGGCTGTGGATGGTGGTGGTGGTGGTGGCCCCATTGCGGCGGTGCCGGAATCTAGCAAGAAGGCTTCGGCTTTGGGTGGTTCAAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTGTGCATGGAGGGGGTGAAGGGAATGGGAGTGGGAATGCTGAGGATAACATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1482 0.5621 MDGHGGGNRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDHLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVNDAWTVLSNPTKKAFYDNQLRLLTQPAPPPAPPPPPPPPPPAPVTFFPIQPPQPNLNPNPLPQRESPRPRDRVEVEPPPPTSQEDNASELTRVSEAETEGASFWTACPYCYVMYEYLKVYEDCTLRCQSCRRGFHAVVVRSPPKDATFGSFCSWGFFPLGFSGDFKDINGSSSKWNPFSPLFPCALKGGEESKRYQKGPWVFYDDDASAEFMDGGSDTTEDDSDDADWHGGNQKGTTKRRKRRKRRSNVGGGDVRRVPTIERPRRGVHNGVGNDNLGNGEAVDGGGGGGPIAAVPESSKKASALGGSRRRSERNLGKLDLNVEFSNEVEEPVHGGGEGNGSGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01030 493 Pfam DnaJ domain 70 132 IPR001623 -
Pumo2g01030 493 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Pumo2g01030 493 MobiDBLite consensus disorder prediction 327 427 - -
Pumo2g01030 493 CDD DnaJ 70 124 IPR001623 -
Pumo2g01030 493 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Pumo2g01030 493 SMART dnaj_3 69 127 IPR001623 -
Pumo2g01030 493 Gene3D DnaJ domain 65 140 IPR036869 -
Pumo2g01030 493 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 363 - -
Pumo2g01030 493 MobiDBLite consensus disorder prediction 350 364 - -
Pumo2g01030 493 MobiDBLite consensus disorder prediction 140 179 - -
Pumo2g01030 493 MobiDBLite consensus disorder prediction 138 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01030 Pumo-Chr2 15420362 15422338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01030 11 492 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.212 1.75e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01030 - - gmx:100818960 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01648 6 24243020 24245202 Pumo2g01030 2 15420362 15422338 PCT