Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01029 ATGGCGGCTCTGGGAGGTGTCGATGACAAACTTTTTCACGAGAGGGAGAGCCAAGGATCTGGTAACTGGAAAATGACAAAACCGAAGAAAGAAATAAAGATGGATAAAATTGCCGCTAGGCAGGCAGGTGACTTTTTCCAAGAGGAAGAGAGGGCTTTTTTAGAAGGCACAGGAACTTTCTACTCTTGTGATGATGAGATAGCTCTCACAATCTTTTCTGCTGCTGGCAATCTCTTCTTATACGCTAGCTCAAGTGTTCAGCAGGTAGTTGAAAGGTACAATCTCCATATAAGGATTGACAAATTACAACACAGATCTGTAGAGCTTCAGCCTGACAGCGACACCTACAACAACTTTTTTGTGATGCGCAATGAAGTGGCAGACAAGACTCGTGAGCTGAGGGTTGAGTTAGATGTGATATTTAGGTTTCACACTATTAGTTAA 444 0.4279 MAALGGVDDKLFHERESQGSGNWKMTKPKKEIKMDKIAARQAGDFFQEEERAFLEGTGTFYSCDDEIALTIFSAAGNLFLYASSSVQQVVERYNLHIRIDKLQHRSVELQPDSDTYNNFFVMRNEVADKTRELRVELDVIFRFHTIS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01029 147 SUPERFAMILY SRF-like 63 104 IPR036879 GO:0003677|GO:0046983
Pumo2g01029 147 Gene3D - 61 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01029 Pumo-Chr2 15396221 15410198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01029 25 134 MADS-box Gene Family AT2G22540 36.975 2.17e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01029 - - zju:107427902 82.4185