Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01012 ATGCCTGATGCAAGAGTGGATGCTACTTTGAAAGCTTTGGTTACAGCAGGTTTTGGTGCTGCTGGACAGAAGTGCACAGCACTGAGTGCTGTTGTTTTTGTTGGAAGTTTCAGTCAATGGAAAGATAAACTAGTAGAGCATGCCAAAGCACTTAAGGTCAATGCTGGAACAGAGCCAGACACAGACATTGGTCCTGTTATTAGCAAACAGGCAAAGGAACACACTTGCAGATTGATTCAAACAGGTGTGGAATCTGGTGCAAAACTAGTGCTTGATGGGAGAAATATTGTGGTTCCAGGATATGAACATGGAAACTTCATTGGTCCTACAATCTTGTCAGATGTCACAGTTGATATGGGATGCTACAAGGAGGAGATTCTTGGCCCAGTTCTTTGTGTATGGAGATATGGTAACGGAGCATCCATTTTTACAACTTCTAATGCAGCGGCAAGAAAATTCCAGACTGAGGTTGAAGTTGGACAGGTTGGCATAAATGTTCCAATCTCTGTTTCATTGCCCTTTTCTTCATTTATTAGCTCCAGGCCATCTTTTGTTGGTGATTTTAATTTTGATGGCAGAGCTGGAATTCAGTTTTACACACAAATTAAGACTGTCACTAAACAATGGACTGACTCATTAGATGGAGATGAAGCAACTCTTGAAATGCCTTTTGCTTAG 678 0.4145 MPDARVDATLKALVTAGFGAAGQKCTALSAVVFVGSFSQWKDKLVEHAKALKVNAGTEPDTDIGPVISKQAKEHTCRLIQTGVESGAKLVLDGRNIVVPGYEHGNFIGPTILSDVTVDMGCYKEEILGPVLCVWRYGNGASIFTTSNAAARKFQTEVEVGQVGINVPISVSLPFSSFISSRPSFVGDFNFDGRAGIQFYTQIKTVTKQWTDSLDGDEATLEMPFA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01012 225 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 224 IPR010061 GO:0004491
Pumo2g01012 225 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 18 29 IPR016160 GO:0016491
Pumo2g01012 225 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 212 IPR016163 GO:0016620
Pumo2g01012 225 SUPERFAMILY ALDH-like 1 211 IPR016161 GO:0016491
Pumo2g01012 225 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 1 178 - -
Pumo2g01012 225 Pfam Aldehyde dehydrogenase family 2 205 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01012 Pumo-Chr2 15220075 15222727 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01012 1 193 Aldehyde Dehydrogenase Gene Family AT2G14170 66.346 4.24e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01012 K00140 - cave:132177147 327.791