LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g00996	ATGGAGAACTATTCATACCAATCGTACCCAGATTCAGGCGACTCCTCTCCACGCTCCAGAGAGATCGACTTCGAGAACCCTCCACCATGGGACGACCAACAACAAAACTACAAAGCCAAGTTCATGTGCAGCTATGGCGGCAAGATCCACCCACGCTCCCACGACAACCAACTCTCCTACGTCGGCGGCGAGACCAAAATCCTCGCCGTCGACCGCACCATCAAGTTCCCCGCCATGCTGGCCAAACTCTCCGCCCTCTGCGACTCCACTCCCCAAGACCTCACCTTCAAGTACCAGCTCCCCGGCGAAGACCTCGACGCCCTCATCTCCGTCACCAACGACGACGACCTCGACCACATGATGCACGAGTACGATCGCCTCTACCGCGCTTCCGCTAGGCCCGCCCGCATGCGATTATTCATCTTTCTCTCCGATACTACTCTTCCTTCGCCTCCTGCTTCTGCTCCACCCGACCCGGTTATTAAACCTAATAACGTCGATTTCCTCTTCGGTCTCGAGAAGGGCCTTGCTGTCCCTCTCGCTGCTCCGCCGCCTCCCGTTGCTGTCAAATTTAATGATCCCGTGCCGGAGCCCGTCGCGCCGCCGCCGGAGTACCAGTCGCTATTGAATTTGAACCCTGCGACCGTGTTGCGGTTTCGGATCCGAACGCCATTCAGCGCCAGTTGCAGCAGTTGCAAATTGCTGGAGAACGAGCAAGCTGCGTATCGGAGGAAGAGCGAGGATAATTACCCCGCCGGTGATTATTACGTTCAGAAGGTGCCTGAGAAGTTCCCGCCGGCGAATTTTCCTGCCAGCGCGCCGGGTTATTGGCCGGAAAAGCATGTTGGCGAGGTTTATCAGCCAGCGGTGTCGGCTGCGTCCGGCGGAGGGGAACCGCCGGTTTATATGATTCCGGCGCAGGGGACGTTCTATCACGCGCCGGTGCTGCGACCTCCGGGCACTCAGGGGTACTACGCGGTGCAACGAATGGGTTCTGACAATTACCGTGAAGCGCCGATGTACGGCGGCGTTCCGCCGCCTAAAGCGGCGGTTCCGGCGCAGCAAGCGGTTAAGGCTCCCGCGTATACGGAAGGATTTGGTGTGGTTCGGCCAAGTGGCATACTGGACAATACGGGTGCTCCGTACGCGCAGGTGGCGTACGATAGTGCAAGTGGGAGACAGGTTTACTATACTGCGCCCGGTGGTGGTGTAGTGCACGCTCCTCCGTACCAAGGGGTTTTTCCACCCGTCACCGCTGATATGAGACCGGGTGGGGTGTCGCTGGGTCAGGATGTTAAAGTCATAAGCAAGGTTACTCAAGGTTCAGTGTGA	1332	0.5818	MENYSYQSYPDSGDSSPRSREIDFENPPPWDDQQQNYKAKFMCSYGGKIHPRSHDNQLSYVGGETKILAVDRTIKFPAMLAKLSALCDSTPQDLTFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPARMRLFIFLSDTTLPSPPASAPPDPVIKPNNVDFLFGLEKGLAVPLAAPPPPVAVKFNDPVPEPVAPPPEYQSLLNLNPATVLRFRIRTPFSASCSSCKLLENEQAAYRRKSEDNYPAGDYYVQKVPEKFPPANFPASAPGYWPEKHVGEVYQPAVSAASGGGEPPVYMIPAQGTFYHAPVLRPPGTQGYYAVQRMGSDNYREAPMYGGVPPPKAAVPAQQAVKAPAYTEGFGVVRPSGILDNTGAPYAQVAYDSASGRQVYYTAPGGGVVHAPPYQGVFPPVTADMRPGGVSLGQDVKVISKVTQGSV	443

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g00996	443	MobiDBLite	consensus disorder prediction	1	31	-	-
	Pumo2g00996	443	MobiDBLite	consensus disorder prediction	1	15	-	-
	Pumo2g00996	443	Pfam	PB1 domain	54	142	IPR000270	GO:0005515
	Pumo2g00996	443	PANTHER	OS05G0427100 PROTEIN-RELATED	8	324	-	-
	Pumo2g00996	443	SMART	PB1_new	53	144	IPR000270	GO:0005515
	Pumo2g00996	443	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	58	144	-	-
	Pumo2g00996	443	SUPERFAMILY	CAD & PB1 domains	54	146	-	-
	Pumo2g00996	443	CDD	PB1_UP2	42	142	-	-
	Pumo2g00996	443	Gene3D	-	59	144	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g00996	Pumo-Chr2	15033899	15035627	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo2g00996	37	142	MAP Kinase Kinase Kinase	AT5G57610	46.226	4.93e-25	106

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g00996	-		-	gmx:100780332	692.189

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo2g00996	2	15033899	15035627	Pumo2g00996	2	15033899	15035627	ECH
	Pumo6g01705	6	25747017	25748848	Pumo2g00996	2	15033899	15035627	PCT