Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00986 ATGTTCGCCGGACGAATTTTCCGGTACGGTTCTCCCACTACTCTGTTATTCCTCTGCCTCGTTGCTTCCTCCCTCTCAGATGAACTTCAACCACTCATGAAGTTCAAGTCCTCTATCCAAAGTTCCTCTGCAGATGTTTTCAGTTCATGGACACAAGCAATTTCTCCCTGCAAATTCACCGGGATTGTATGCAACTCCAAAGGTTTTGTTTCAGAAATCAACCTTGGGGAGAAGCAACTAGAGGGTACTGTTCCTTTTGATTCACTTTGCGAGCTTCAATCGCTTGAGAAGATATCTCTGGGGTCCAACGTCTACTTGCATGGCAGCATCAGTGAGGGGTTGAGGAAGTGCACCAACTTGAAGCAATTGGACTTGGGTAATAATTTTTTCACTGGGGCAGTGCCTGATTTGTCAAGTTTGCACAAGTTGGAGTTGTTGAGTTTAAACAACAGTGGAATTTCTGGGGCGTTTCCATGGAAATCATTGGAAAATCTAACTAGTCTTGAGTTCCTGAGTCTTGGGGATAACCTATTGGAGAAAACTCCTTTCCCTTTGGAGGTCTTAAAGCTTGAAAAATTGTATTGGCTTTACCTCACAAATTGCAGCATCACTGGGAATATTCCATTGGGGATTGGGAATCTTACTCGGCTTCAGAATCTTGAGCTTTCTGACAACCATTTGTCTGGTGAGATTCCAGCTGATATTGTAAAGCTTCAGAGGCTGTGGCAGCTTGAGTTATATGATAACTATTTGAGTGGGAAAATCCCAGTTGGATTTGGCAACCTTACTAGTCTTGTTAACTTTGATGCTTCTTATAATCAGCTTGAAGGTGATCTTTCTGAGCTAAGGTCCTTGACAAAACTTGCATCCCTTCATCTTTTTGGGAACAAGTTCTCAGGAGAAATTCCAAAGGAGATTGGAGATCTCAAGAATCTCACAGAATTTTCTCTTTATAGTAACAACTTCACTGGCCCTCTTCCTCAAAAGCTTGGCTCATGGGTTGGCATGCAATACATTGATGTTTCAGACAATTCTTTTTCTGGTCCTATACCACCTCACCTGTGCAAGAACAACCAAATCGATGAACTAGCACTGTTGAACAACAGCTTCAGTGGAACTATACCAGAAACATATGCAAACTGCACATCTTTGGCTCGTTTTCGCCTGAGCAGGAATTCACTTTCGGGTGTTGTTCCTGCAGGCATATGGGGCTTGCCAAATTTGAAACTTATTGATCTTGCAATGAACCAGTTTGAAGGTCCAGTGACATCTGATATTGCCAAAGCAAAATCTCTGGCTCAACTGTTGTTATCTGACAATAAGTTCTCAGGTGAGTTGCCATGGGAAATATCAGAAGCTTCTTCATTGGTGTCAATTCAGCTAAGTTCAAATCAAATTTCTGGTCACATACCAGAAACCATTGGCAAGTTGAAGAAACTAAGTAGTCTTACTTTGAATGGGAACAATCTTTCTGGTATTGTACCAGATTCCATTGGTTCTTGTACTTCTCTTAATGAGATAAACCTTGCTGGTAACTCTCTTTCTGGGGCTATACCAGCTAGCATTGGTTCTCTTCCAACCCTCAATTCATTGAACTTGTCCTCAAACAGGCTTTCTGGTGTAATTCCATCTAGTTTATCATCTCCAAGACTTAGCCTTCTTGACTTATCAAACAACCAGTTGTTTGGTTCCATACCAGATCCACTAGCTATTTCAGCCTTCAAAGATGGGTTCATGGGAAACCCTGGCTTATGCAGCCAGACTTTAAAAGGTTTCAGACCATGTCCAATGGAATCTAGCAGCTCCAGGCGAGTCAGAAACCTATTAATCTGTTTCATTGCTGTTGTAATGGTTCTGCTTGGAGCATGTTTCCTCTTCACAAAACTAAAGCAGAACAAGTTTGAGAAGCCACTGAAGAGTACTTCCTGGGATGTCAAGCAGTACCATGTACTAAACTTCAATGAGAATGAAGTCGTTGATGGGATCAAGGCTGAGAATTTGATTGGCAAGGGAGGATCCGGGAATGTTTATAGGGTTGTGCTTAAAAGTGGGGCAGAATTTGCAGTGAAACATATATGGACTTCAAATCTAAGTGAGAGGGGAAGTTGTAGGAGCACCTCATCTATGCTAAGAAGGAGTTCAAGGTCACCTGAGTATGATGCAGAAGTGGCCACTCTTAGCTCTATAAGGCATGTGAATGTGGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGCAGTTTGCTTGTTTATGAGTTTTTACCAAATGGGAGCTTGTGGGACAGGTTACACACCTGTAAGAATAAGTCTCAAATGGGGTGGGAGGTTAGGTATGACATTGCATTGGGTGCTGCTAGAGGATTGGAGTACCTGCACCATGGGTGTGATAGACCTGTTATACATAGGGATGTCAAATCCAGTAACATTTTGCTGGATGAGGAATGGAAGCCAAGGATTGCTGATTTTGGCCTTGCAAAGATTCTTCAGGGAGGAGCAGGCAATTGGACCAATGTCATTGCTGGAACACTTGGATACATACCTCCTGAGTATGCCTACACTTGTAGGGTGACAGAGAAGAGTGATGTTTACAGCTTTGGGGTAGTGCTGATGGAGTTGGTAACGGGGAAGAGGCCTATGGAGCCAGAGTTTGGAGAGAATCATGATATTGTGTATTGGGTATGCAACAATATTAGGAGCAGAGAAGATGCTCTTGAATTGGTGGACCCTACCATTGCAAAGCATTACAAAGAGGATGCCATGAAGGTGTTGAAAATTGCAACACTATGCACGGGGAAAATTCCAGCTTCAAGACCCTCAACGAGAATGTTGGTTCAAATGCTGGAAGAGGCAGATCCATTTACCACAACCAAAATGATTGTGACCATTGATGCTTAA 2895 0.4266 MFAGRIFRYGSPTTLLFLCLVASSLSDELQPLMKFKSSIQSSSADVFSSWTQAISPCKFTGIVCNSKGFVSEINLGEKQLEGTVPFDSLCELQSLEKISLGSNVYLHGSISEGLRKCTNLKQLDLGNNFFTGAVPDLSSLHKLELLSLNNSGISGAFPWKSLENLTSLEFLSLGDNLLEKTPFPLEVLKLEKLYWLYLTNCSITGNIPLGIGNLTRLQNLELSDNHLSGEIPADIVKLQRLWQLELYDNYLSGKIPVGFGNLTSLVNFDASYNQLEGDLSELRSLTKLASLHLFGNKFSGEIPKEIGDLKNLTEFSLYSNNFTGPLPQKLGSWVGMQYIDVSDNSFSGPIPPHLCKNNQIDELALLNNSFSGTIPETYANCTSLARFRLSRNSLSGVVPAGIWGLPNLKLIDLAMNQFEGPVTSDIAKAKSLAQLLLSDNKFSGELPWEISEASSLVSIQLSSNQISGHIPETIGKLKKLSSLTLNGNNLSGIVPDSIGSCTSLNEINLAGNSLSGAIPASIGSLPTLNSLNLSSNRLSGVIPSSLSSPRLSLLDLSNNQLFGSIPDPLAISAFKDGFMGNPGLCSQTLKGFRPCPMESSSSRRVRNLLICFIAVVMVLLGACFLFTKLKQNKFEKPLKSTSWDVKQYHVLNFNENEVVDGIKAENLIGKGGSGNVYRVVLKSGAEFAVKHIWTSNLSERGSCRSTSSMLRRSSRSPEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHTCKNKSQMGWEVRYDIALGAARGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLAKILQGGAGNWTNVIAGTLGYIPPEYAYTCRVTEKSDVYSFGVVLMELVTGKRPMEPEFGENHDIVYWVCNNIRSREDALELVDPTIAKHYKEDAMKVLKIATLCTGKIPASRPSTRMLVQMLEEADPFTTTKMIVTIDA 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00986 964 Pfam Leucine rich repeat 361 418 IPR001611 GO:0005515
Pumo2g00986 964 Pfam Leucine rich repeat 455 514 IPR001611 GO:0005515
Pumo2g00986 964 Gene3D Ribonuclease Inhibitor 282 603 IPR032675 -
Pumo2g00986 964 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Pumo2g00986 964 Gene3D Ribonuclease Inhibitor 184 281 IPR032675 -
Pumo2g00986 964 Pfam Protein kinase domain 665 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00986 964 FunFam Receptor-like protein kinase 7 110 359 - -
Pumo2g00986 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Pumo2g00986 964 SMART LRR_typ_2 165 190 IPR003591 -
Pumo2g00986 964 SMART LRR_typ_2 477 500 IPR003591 -
Pumo2g00986 964 SMART LRR_typ_2 285 309 IPR003591 -
Pumo2g00986 964 SMART LRR_typ_2 525 548 IPR003591 -
Pumo2g00986 964 SMART LRR_typ_2 214 238 IPR003591 -
Pumo2g00986 964 SUPERFAMILY Protein kinase-like (PK-like) 648 948 IPR011009 -
Pumo2g00986 964 SMART serkin_6 662 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00986 964 FunFam Inactive leucine-rich repeat receptor-like protein kinase 375 471 - -
Pumo2g00986 964 Gene3D Phosphorylase Kinase; domain 1 645 753 - -
Pumo2g00986 964 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 754 962 - -
Pumo2g00986 964 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 472 593 - -
Pumo2g00986 964 SUPERFAMILY RNI-like 281 565 - -
Pumo2g00986 964 Gene3D Transferase(Phosphotransferase) domain 1 754 959 - -
Pumo2g00986 964 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 947 - -
Pumo2g00986 964 SUPERFAMILY L domain-like 53 327 - -
Pumo2g00986 964 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Pumo2g00986 964 FunFam Receptor-like protein kinase HAIKU2 645 753 - -
Pumo2g00986 964 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Pumo2g00986 964 ProSiteProfiles Protein kinase domain profile. 662 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00986 Pumo-Chr2 14957731 14961927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00986 13 964 Receptor kinase-like Gene Family AT1G09970 57.083 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo2g00986 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00986 - - gmx:100811489 1755.34