Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00970 ATGGCGGGTTTTGGTGCTGAAAGCGACATCTATTGCTTGCAAACCATCAAGAAATTAGATCAGTTTAATCACTTATCTAGCTGGGATTTCGAGAACTACACTGAAGTGGAAGATAGAGTAGTCAGTCTCTGGCTTTCTCACAAGGGGCTGAAGGGCCAGTTTCCTCGTTGCATAGAAAATTTCACATGGTTGCAGACTCTGGACCTCTCACACAACGAGCTTTCTGGATATATCCCATCTGATATATCAACTAAGCTGTCATATCTGATCACACTTGATCTCTCAAATAACAATTTCTATGGTGAAATTCCAAAGGGTGTTGCCAATTTTTCTATCTTAATTACCCTTAGACTTGATAGCAACCAGTTAAGTGGCCAAATCCCACAAGAGCTTGGGTTGCTTCCCTGGCTTAGAGATTTTAGTGTTGCTAACAACTTGTTAGAAGGGCCAGTTCCTGTTTTTGACAGCAATGTTAATGTTATGCATTAG 489 0.409 MAGFGAESDIYCLQTIKKLDQFNHLSSWDFENYTEVEDRVVSLWLSHKGLKGQFPRCIENFTWLQTLDLSHNELSGYIPSDISTKLSYLITLDLSNNNFYGEIPKGVANFSILITLRLDSNQLSGQIPQELGLLPWLRDFSVANNLLEGPVPVFDSNVNVMH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00970 162 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 40 153 - -
Pumo2g00970 162 SUPERFAMILY L domain-like 19 154 - -
Pumo2g00970 162 Gene3D Ribonuclease Inhibitor 12 161 IPR032675 -
Pumo2g00970 162 Pfam Leucine Rich Repeat 64 83 IPR001611 GO:0005515
Pumo2g00970 162 PRINTS Leucine-rich repeat signature 64 77 - -
Pumo2g00970 162 PRINTS Leucine-rich repeat signature 86 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00970 Pumo-Chr2 14423061 14425707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00970 7 157 Receptor kinase-like Gene Family AT3G28450 43.114 3.19e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00970 - - gmx:106795644 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01750 6 26467166 26467984 Pumo2g00970 2 14423061 14425707 PCT