Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00962 ATGCCACAGAAACAGAAGCTGCGCCCTTCTCCTCTCGACGAGCCACCCACCGCTTCCTCCTCCGATTCCGAGGAAGAAGACCAGCAACAACCATCCTCTCAGCAACACCACGAAGAAGAGGAAGAAGAAGTTTCCTCCGGAGAAGAGGAAGAAGAAGCTTCCTCTGAGGAAGAAGAAGAAGACGAAGATCTCCCACCACCCCTCTCCAAAAACCCTCCACCCCCTCCCTCAAACCCTCATCCCCAACCCTCTTCCTCCGAATCCGAAACCGAATCAGGCTCCGAGACCGAATCCGAACCCCAACCCCAACCCCAACCCACTCCCGCCAAGGTAAAACCCTTAGCCTCCAAGCCCATGGACCAGGCCCAAAAGCCCAAGGCCCTGCCCTCCCCGCCAAAATCGGCATCCAAGCGCCCCGCCGAGAACAACAACAACAACAACAACAACGCTCGTGTCCCCGACCCCAAACGTGCGAAGAAGAAAGCCACCGATTCTTCCTCTGCCGCCGCCGCCGCCGCCGCAGCCGCTTCCGACGAGGAGATGGAGGAGGACGGGAAGAAGTCCGGTGACCACTCGAAGAGGTCTCAGAGACTGTGGAGCCTGGAGGACGAGCTCGCCGTTCTGAAGGGCGCGGCTGAGTTCACTTCAAAAACAGGGCAGGACCCTCTTAAGTCAACCAGTTCCAACGCTTTCCACGATTTCTTGAAGAAGTCGCTACACGCGGAGGTTTCCAGCAACCAGCTGAGAGAGAAGGTTCGAAGGCTGAAGAAGAAGTTTGAGACAGGGAAGAACGGAGAAGTCCCTAAATTTACCAAACCGCACGATCAGAAAGCGTTTGAATGGGCGAAAAAGGTTTGGGGAAGTGAGGGTGGTGGAGGAGCCAATGGGCCGGTGGAGAAGCCCAAGTCCAATGGGAATGCTGCCAAGAGTCCGAAGAAGAAGGAAGCCAGTAGCAGGAATGTGGCCTCTGCTAAGAAACCGAAGCCGGAAGCGAAAGTGGAGTTGGTGCCAGCGGTGTACTCGGAGTTGAAGGATTCTGAAAAGATGCAGATTGATCAAAAGCCTGATGGTGGTGATGCAAGTTTGTTTTTGAGCGAATTGGCTCGATATAAAGACGGGTTTTAG 1125 0.5511 MPQKQKLRPSPLDEPPTASSSDSEEEDQQQPSSQQHHEEEEEEVSSGEEEEEASSEEEEEDEDLPPPLSKNPPPPPSNPHPQPSSSESETESGSETESEPQPQPQPTPAKVKPLASKPMDQAQKPKALPSPPKSASKRPAENNNNNNNNARVPDPKRAKKKATDSSSAAAAAAAAASDEEMEEDGKKSGDHSKRSQRLWSLEDELAVLKGAAEFTSKTGQDPLKSTSSNAFHDFLKKSLHAEVSSNQLREKVRRLKKKFETGKNGEVPKFTKPHDQKAFEWAKKVWGSEGGGGANGPVEKPKSNGNAAKSPKKKEASSRNVASAKKPKPEAKVELVPAVYSELKDSEKMQIDQKPDGGDASLFLSELARYKDGF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00962 374 MobiDBLite consensus disorder prediction 67 82 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 1 198 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 42 64 - -
Pumo2g00962 374 Coils Coil 37 57 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 136 152 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 179 198 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 284 334 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 14 28 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 83 100 - -
Pumo2g00962 374 MobiDBLite consensus disorder prediction 306 332 - -
Pumo2g00962 374 Pfam Protein of unknown function, DUF573 196 287 IPR007592 GO:0006355
Pumo2g00962 374 PANTHER BNAANNG10740D PROTEIN-RELATED 37 328 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00962 Pumo-Chr2 14361506 14362678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00962 85 290 GeBP Transcription Factor Family AT1G61730 36.866 5.22e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pumo2g00962 DUF573 3e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00962 - - gmx:100807745 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00962 2 14361506 14362678 Pumo2g00962 2 14361506 14362678 ECH