Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00951 ATGGAGTATGAAGATGAAGATTGGCTATGTGTTACTATGGATGAGTTTTCTCTTGCTACTGAAAATGGTTGTAGCAGGCAAATGATGAGTAGGAAGAGGAACTATGATGATGACACAAGAGAGTACAAATCAAAGAACCTTGAGACTGAAAGGAGGAGGAGGGAGAAGCTCAGTAGCAGGCTTTTGATGCTGCGGTCTATAATGAATAAAGCAACAATTATTGAAGATGCTATCACCTACATTGAGAAGCTGCAAGACAAAGTCCAGAGTCTCAGCCAAGAGCTTCACCAAATGGAAGCAACTTCAGAGGAAACAGCAGAGACAAAAATAGTTGAAATTGATGCTGCGGAAGATATGAAGAATTGGGGGATACAGGAAGAGATCCGAGTGGCACAAATAAACGAGAATAAACTCTGGGTCAAGATTATCATTGAGAAGAAGAGGGGAAGATTCAGCAAATTGATGGAGGCCCTCAATAATTTTGGCATTGAGCTCATAGACACCAATCTCACAACCACAAAAGGAGCATTTCTGATTACAAGCTGCATACAGGGCAAGAATGGTGAAAGACTTGAAATTCATCAAACCAAGAATTTCTTGCAAGATATTATCAATGACATATAG 624 0.4006 MEYEDEDWLCVTMDEFSLATENGCSRQMMSRKRNYDDDTREYKSKNLETERRRREKLSSRLLMLRSIMNKATIIEDAITYIEKLQDKVQSLSQELHQMEATSEETAETKIVEIDAAEDMKNWGIQEEIRVAQINENKLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNLTTTKGAFLITSCIQGKNGERLEIHQTKNFLQDIINDI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00951 207 Coils Coil 74 108 - -
Pumo2g00951 207 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 30 187 - -
Pumo2g00951 207 MobiDBLite consensus disorder prediction 30 51 - -
Pumo2g00951 207 SMART finulus 47 90 IPR011598 GO:0046983
Pumo2g00951 207 Gene3D - 38 110 IPR036638 GO:0046983
Pumo2g00951 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 101 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00951 Pumo-Chr2 14205367 14206509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00951 29 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 41.969 1.44e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00951 - - gmx:100793107 355.525