Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00950 ATGGAGTATGCAGATGAGGATCGGTTATGTTTTACTATGGAAGAGTTTTCTCTTGCTACCGAAAATGGTAGTAGCAGGCACAGGATGAGTAGGAAGAGGAACTATGATGATGACACAAGAGAGTACAAATCAAAGAACCTTGAGATTGAAAGGAGGAGGAGGGAGAAGCTCAGTAGAAGGCTCTTGATGCTGCGAGGAACAATTATTGTAGATGCTATCACCTACATTGAGAAGCTGCAACACGAAGTCCAGCGTCTCAGCCAAGAGCTTCACCAAATGGAAGCAACTTCAGAGAAAACAGCAGAGCCAAAAATAGATGAAATTGATGCTGTGGAGGATATGAAGAATTGGGGGATACAGGCTGAGATCAGAGTGGCACAGATAGACGAGAATAAACTCTGGGTCAAGATCATCGTTGAGAAGAAGATGGGAAGATTCAGCAAATTGATGGAGGCCCTCAATAATTTTGGCATTGAGCTCATAGACACCAATCTCACAACCACAAAAGGAGCATTTCTGATTACAAGCTGCATACAGGGCAAAGATGGTGAAAGACTTGCAATTCATCAAACCAAGAGTTTGTTGCAAGATATTATCAATGACATATAG 609 0.422 MEYADEDRLCFTMEEFSLATENGSSRHRMSRKRNYDDDTREYKSKNLEIERRRREKLSRRLLMLRGTIIVDAITYIEKLQHEVQRLSQELHQMEATSEKTAEPKIDEIDAVEDMKNWGIQAEIRVAQIDENKLWVKIIVEKKMGRFSKLMEALNNFGIELIDTNLTTTKGAFLITSCIQGKDGERLAIHQTKSLLQDIINDI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00950 202 Coils Coil 69 96 - -
Pumo2g00950 202 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 24 196 - -
Pumo2g00950 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 95 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00950 Pumo-Chr2 14184170 14185283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00950 23 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 38.424 5.50e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00950 - - gmx:100793637 343.969