Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00942 ATGGCGAAAACAGAGTTCACCCTTTTATTTCTTGTTAGTTGTTGCTATTTGCTATCCTTGTTTCCTACAGCTTGGGAAGCAGAGGATGCAATAACTCCACCACAAACTATCAGTGGCAACCAGACACTAGTCTCACCTTCCCAAAACTTTGAACTGGGTTTCTTCAGTCCTGCCAATTCCAATCGCCTCTATCTTGGAATATGGTACAATCATATCCCAAAACAGACAGTTATTTGGGTTGCAAATAGAGACAAACCACTAGTTAACTCTGGTGGCTCCTTAACATTCAGCAATGATGGCAAGCTCATCCTTCTCAGTCACACAGGAAGTGTTGTATGGTCTTCAAACTCATCTGGACCTGCAAGAAACCCAGTGGCACATCTTCTAGACTCTGGAAACTTTGTGTTGAAGGACTATGGAAATGAGGGATATTTGTGGGAGAGTTTTGATTATCCATCTGACACGTTGATACCAGGAATGAAGCTTGGTTGGAACTTCAAAACTGGCTTGAACCGGCATTTGACTTCCTGGAAAAGCCATTCTGATCCTTCTTCAGGGGAATACACCTACAGTGTGGATCCACGTGGCATTCCTCAGCTTTTTCTTCACAAGGGAAACAAGAAGGTTTTCAGAAGTGGTCCGTGGTATGGACAACAATTCAAAGGTGACCCGGCTCTCAGTGCAAATCCAGTTTTCAAACCCATATTTGTTTTTGATTCTGATGAAGTGTCTTACTCATATGAGACCAAAGACACCATTGTTTCAAGATTTGTGCTGAATCAGTCTGGTTTGATTCAGCATTTTTCATGGAATGATCATCATTCCAGTTGGTTCTCTGAATTCTCAGTTCAAGGGGACCGTTGTGATGATTATGGCCTTTGTGGTGCTTATGGTTCTTGTAACATCAAAAGCTCCCCGATTTGCAAGTGTTTGAAGGGTTTTGAGCCTAAGGTTTCGCAAGAATGGGAGAAGAATGAGTGGTCAGGTGGATGTGTTAGGAAGAATTCACAGGTTTGCAGCAATGGAGACACATTTAAGCAGTTTACAGGAATGAAACTACCAGATGCTGCTGAGTTTCTTACAAACTATAGCATCAGCATCGATCACTGTGAGGAAGAATGCTCCAAGAACTGCTCTTGTGTTGCTTATGCCAAACTAGATATAAATGCAAGCGGCAAAGGCTGTATTGCTTGGTTTGGGAATTTATTTGATATAAGAGAGCTTTCTGTGAATGGACAAGATTTCTACGTGAGAGTTCCAGCTTCAGAATTAGGTAAGAACATTGAAGGTTCAAGTGTTGATGAAAACAAAAGGAAGAAACTCATACTGTTCCCTGTGACTGCATCTGTAACTTCAACCATTATTATATCAGCCTTATGGTTGATAATTAAGAAATGCAGAAGAAAAAAAGCCAAAGAGACAGGTGATCAGTTAAGTGTTGGCAGAGCTAGGAGTGAAAGGAATGAATTTGAACTCCCATTGTTTGAGATTGCCATAATTGAAGCCGCCACTGAGAATTTCTCTATTTACAATAAGATCGGAGAAGGTGGATTTGGTCCTGTATACAAAGGTCAACTTCCTCCAGGACAAGAAATAGCAGTGAAAAGGCTGTCAGAGAATTCTGGACAAGGCCTGGAGGAGTTCAAGAATGAGGTTATTTTGATCTCCCAACTTCAGCATCGAAATCTTGTCAAGCTTCTGGGTTGTTGCATACATGGAGAAGATAAAATGCTGGTTTATGAATACATGCCAAACAGAAGCTTGGACTCCTTATTATTTGATGAAACCAAGCGTTCTGTGCTCAGTTGGCAAAAGAGGCTAGACATAATTATTGGCATTGCTCGGGGACTTCTCTACCTTCACAGAGATTCAAGACTGAGAATAATCCATAGAGACCTGAAAGCAAGCAATGTTCTTTTAGATGGTGAAATGAACCCAAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAAGAGAGTAGTGGGAACCTATGGATATATGTCCCCAGAGTATGCAATAGATGGACACTTCTCTTTAAAATCAGATGTTTATAGCTTCGGGGTTTTACTCTTGGAGCTGTTGAGCGGCAAGAAAAACAAAGGATTTTTTCACCCAGATCACAAACTGAATCTCCTAGGCCATGCATGGAAGCTATGGAATGAAGAAGATAGGGCCTTGGAGCTGATGGATCCATTGCTTGAGAATCAGTTTCCTACATCTGAAGCTCTAAGGTGTATTCAAGTGGGTCTGTCATGCGTTCAACAGCACCCAGAAGATAGGCCAACAATGTCATCAGTGCTTTTGATGTTGGACAGTGAGAGTGTGTTGGTCCCCCAACCTGGAAGGCCAGGATTATATTCGGAGAGATTTTTCTCTGAGACAAATTCATCATCACGTGCTGGACTGAACTCTGGTTCCAATGACATAACTGTTACTTTAGTAGAGGGTCGTTGA 2481 0.4168 MAKTEFTLLFLVSCCYLLSLFPTAWEAEDAITPPQTISGNQTLVSPSQNFELGFFSPANSNRLYLGIWYNHIPKQTVIWVANRDKPLVNSGGSLTFSNDGKLILLSHTGSVVWSSNSSGPARNPVAHLLDSGNFVLKDYGNEGYLWESFDYPSDTLIPGMKLGWNFKTGLNRHLTSWKSHSDPSSGEYTYSVDPRGIPQLFLHKGNKKVFRSGPWYGQQFKGDPALSANPVFKPIFVFDSDEVSYSYETKDTIVSRFVLNQSGLIQHFSWNDHHSSWFSEFSVQGDRCDDYGLCGAYGSCNIKSSPICKCLKGFEPKVSQEWEKNEWSGGCVRKNSQVCSNGDTFKQFTGMKLPDAAEFLTNYSISIDHCEEECSKNCSCVAYAKLDINASGKGCIAWFGNLFDIRELSVNGQDFYVRVPASELGKNIEGSSVDENKRKKLILFPVTASVTSTIIISALWLIIKKCRRKKAKETGDQLSVGRARSERNEFELPLFEIAIIEAATENFSIYNKIGEGGFGPVYKGQLPPGQEIAVKRLSENSGQGLEEFKNEVILISQLQHRNLVKLLGCCIHGEDKMLVYEYMPNRSLDSLLFDETKRSVLSWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDGEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMSPEYAIDGHFSLKSDVYSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWNEEDRALELMDPLLENQFPTSEALRCIQVGLSCVQQHPEDRPTMSSVLLMLDSESVLVPQPGRPGLYSERFFSETNSSSRAGLNSGSNDITVTLVEGR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00942 826 SMART ntp_6 340 419 IPR003609 -
Pumo2g00942 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 149 - -
Pumo2g00942 826 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Pumo2g00942 826 CDD PAN_AP_plant 339 420 - -
Pumo2g00942 826 CDD STKc_IRAK 513 780 - -
Pumo2g00942 826 ProSiteProfiles Protein kinase domain profile. 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00942 826 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Pumo2g00942 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 787 - -
Pumo2g00942 826 Pfam PAN-like domain 339 405 IPR003609 -
Pumo2g00942 826 Pfam D-mannose binding lectin 76 178 IPR001480 -
Pumo2g00942 826 SMART serkin_6 507 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00942 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 770 - -
Pumo2g00942 826 CDD B_lectin 35 152 IPR001480 -
Pumo2g00942 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Pumo2g00942 826 SUPERFAMILY Protein kinase-like (PK-like) 490 779 IPR011009 -
Pumo2g00942 826 ProSiteProfiles Bulb-type lectin domain profile. 28 149 IPR001480 -
Pumo2g00942 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 582 - -
Pumo2g00942 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 183 IPR036426 -
Pumo2g00942 826 Gene3D Transferase(Phosphotransferase) domain 1 583 785 - -
Pumo2g00942 826 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Pumo2g00942 826 Gene3D Phosphorylase Kinase; domain 1 467 582 - -
Pumo2g00942 826 Gene3D - 24 149 IPR036426 -
Pumo2g00942 826 Pfam Protein tyrosine and serine/threonine kinase 509 776 IPR001245 GO:0004672|GO:0006468
Pumo2g00942 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pumo2g00942 826 SMART blect_4 34 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00942 Pumo-Chr2 14110836 14114754 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00942 446 815 Receptor kinase-like Gene Family AT4G05200 54.324 3.86e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g00942 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00942 - - gmx:100804024 1582