Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00938 ATGAAATCAAACTATTATTTCTCTTCCTCACCAAACACTTCATCAACTCTCTCTCTCTCTCTCTTTTACGTTTGCTCTGCAAACATGCCAGGTTTCAATTTCTTCCTCTTTTGCTTCTTGGCATCGTCACACATCACAATTTCATTCTCCGCAGACACCTTAACCTCAACACAAATTCTTCTAACCAACCAAACCCTCGTATCACGAAGCCAAGTCTTCGCTCTAGGCTTCTTTTCCGGGACCAATTCCACTTGGTACTTAGGCATATGGTACAACAACATCAAAGACAGAACCGTAGTATGGGTGGCCAACAGAGACAACCCTCTCGAGAACTCCACAGGATTTCTAACCATCGGAGAAAACGGAAACATAGTTCTCAGGAATCCATCAGGGAAGAACAAGAACCCCGTTTGGTCCTCGAACGAAACCAAAGCCAACAACCCCGTCCTTCAGCTTTTGGACACAGGAAACCTTGTTCTCAGAGAAGCAAACATAACCGACCCTACAAAGTATCTCTGGCAAAGCTTCGATTACCCAACAGACACACTCTTACCCGGCATGAAAATGGGGTGGAACTTAGACACGGGCGTGGAGAAACACCTAACATCGTGGCAAAACACAGGGAGAGACCCTTCAAGTGGAGACTACTCTTTCAAGATAGACACTCGTGGAATACCAGAAATTTTCTTATGGGATGACCAGAACATAATATACAGAAGTGGCCCTTGGAATGGTGAGAGATTCGGTGGGGTGCCAGAGATGCAACCGGATACGGATTCAATTAGGTTTAATTTTTCTTATGATAACCATGGTGTGTACTATTCGTTCTCCATTGGGAACCGTTCTATTTTGTCGAGGCTAGTTGTGACTTCGGGTGGTGAACTTCAGCGTCTTACCTGGGTGCCAAGTAGCAACACTTGGACCAAGTTTTGGTACGCGCGTAAGGATCAGTGTGATGGTTACAGAGCGTGTGGTCCTTATGGCTTGTGTGACTCTAACGCTTCTCCGGTTTGCACGTGTATGGGAGGGTTCAGGCCGAGGAACCAGCAGGCGTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGATTTGGATTGTGGGAGTGACAAGTTTTTGCGTGTGAAGAACGTGAAGCTGCCAGAGACAACCTTTGTGTTCTCGAACAGAAGCATGAACCTAGGCAAGTGTGAGGATCTGTGCCGCACGAATTGTTCTTGCACGGCTTATGCCAACATTGAAATCACAAACGGTGGAAGCGGGTGCGTGACGTGGAGTGGTGAACTCTTCGACATGAGGCTGTATCCTGCGGGTGGACAAGATCTCTATGTTAGATTAGCAGCTTCTGACGTAGATGACATAGGATCTGGAGGTGTCTCTCACAAGACAAACCATACAGGTGAGGCTGTAGGAATTACAATTTCTGCAGCTGTAATAATTTTGGGATTGGTTGTCATTTTCTGGAAGAAGAGGAAACTGTTAAGTATATCGAATGTGAAGACAGACCCTAGAGGTTCTTTCCAAAGAAGTCGGGATTCGATAATGAGTGAGAGGATGTTTTCAACTAATAGACAAAATTCAGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCCACAGACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAGGGGAAGGTTGATGGAAGGCCAAGAAATTGCTGTCAAGAGGTTATCAAAAAATTCCGGGCAAGGAGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTCAGGCTTCAACATCGAAATCTTGTTCGGCTCTTTGGTTGCTGCATTGAGATGGATGAGAAGTTGCTAGTGTATGAGTACATGGAAAACAGAAGCCTTGATTCAATTTTATTCGACAAAGCCAAAAAACCCATATTGGACTGGAAAAGCCGCTTCAACATTATATGTGGCATAGCTAGAGGGCTACTTTATCTGCACCATGATTCCAGATTCAGGATTATTCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAGTGAAATGAACCCAAAAATATCAGACTTTGGGATGGCTAGACTTTTTGGCTCAAATCAGACAGAAGCAAACACATTGAGAATTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGGAACTTCTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTCTAGTGCTGGAAATTATAACTGGGAAGAAAAATAGAGGATTCTATTACTCAAATGATGATATGAATCTTCTAGGGAATGCATGGAAGCAGTGGAGAGATGGCAGTGCATTGGAACTCATTGATTCATCCATTGGCGATTCATATTCACCATCTGAAGTTCTTAGATGCATACACGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGTCTTCAGTGATGTTGATGTTGAGTAGTGAATCTGCATTAATGCCACAACCCAGAAACCCTGGGTTTTCCATAGGGAAGAATCCTGCAGAGACTGATTCTTCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTACTAGATGCTAGGTAA 2622 0.4359 MKSNYYFSSSPNTSSTLSLSLFYVCSANMPGFNFFLFCFLASSHITISFSADTLTSTQILLTNQTLVSRSQVFALGFFSGTNSTWYLGIWYNNIKDRTVVWVANRDNPLENSTGFLTIGENGNIVLRNPSGKNKNPVWSSNETKANNPVLQLLDTGNLVLREANITDPTKYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWQNTGRDPSSGDYSFKIDTRGIPEIFLWDDQNIIYRSGPWNGERFGGVPEMQPDTDSIRFNFSYDNHGVYYSFSIGNRSILSRLVVTSGGELQRLTWVPSSNTWTKFWYARKDQCDGYRACGPYGLCDSNASPVCTCMGGFRPRNQQAWNLRDGSDGCVRNTDLDCGSDKFLRVKNVKLPETTFVFSNRSMNLGKCEDLCRTNCSCTAYANIEITNGGSGCVTWSGELFDMRLYPAGGQDLYVRLAASDVDDIGSGGVSHKTNHTGEAVGITISAAVIILGLVVIFWKKRKLLSISNVKTDPRGSFQRSRDSIMSERMFSTNRQNSGERNMDDIELPMFDFNTITMATDNFSEANKLGQGGFGIVYRGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVRLQHRNLVRLFGCCIEMDEKLLVYEYMENRSLDSILFDKAKKPILDWKSRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFGSNQTEANTLRIVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNDDMNLLGNAWKQWRDGSALELIDSSIGDSYSPSEVLRCIHVGLLCVQERAEDRPTMSSVMLMLSSESALMPQPRNPGFSIGKNPAETDSSSSKQDESWSVNQVTVTLLDAR 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00938 873 SMART serkin_6 554 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00938 873 PIRSF SRK 25 873 IPR024171 GO:0004674
Pumo2g00938 873 Gene3D - 46 176 IPR036426 -
Pumo2g00938 873 Pfam PAN-like domain 369 434 IPR003609 -
Pumo2g00938 873 Gene3D Transferase(Phosphotransferase) domain 1 630 834 - -
Pumo2g00938 873 MobiDBLite consensus disorder prediction 832 862 - -
Pumo2g00938 873 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 37 816 - -
Pumo2g00938 873 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Pumo2g00938 873 Pfam Protein tyrosine and serine/threonine kinase 557 822 IPR001245 GO:0004672|GO:0006468
Pumo2g00938 873 SUPERFAMILY alpha-D-mannose-specific plant lectins 98 245 IPR036426 -
Pumo2g00938 873 SUPERFAMILY Protein kinase-like (PK-like) 530 825 IPR011009 -
Pumo2g00938 873 ProSiteProfiles PAN/Apple domain profile. 369 449 IPR003609 -
Pumo2g00938 873 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 47 176 - -
Pumo2g00938 873 CDD B_lectin 57 179 IPR001480 -
Pumo2g00938 873 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 518 629 - -
Pumo2g00938 873 ProSiteProfiles Bulb-type lectin domain profile. 51 173 IPR001480 -
Pumo2g00938 873 CDD STKc_IRAK 560 825 - -
Pumo2g00938 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Pumo2g00938 873 MobiDBLite consensus disorder prediction 844 862 - -
Pumo2g00938 873 SMART ntp_6 369 448 IPR003609 -
Pumo2g00938 873 Pfam S-locus glycoprotein domain 238 347 IPR000858 GO:0048544
Pumo2g00938 873 Pfam D-mannose binding lectin 98 205 IPR001480 -
Pumo2g00938 873 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 630 833 - -
Pumo2g00938 873 CDD PAN_AP_plant 365 449 - -
Pumo2g00938 873 SMART blect_4 57 179 IPR001480 -
Pumo2g00938 873 ProSiteProfiles Protein kinase domain profile. 554 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00938 873 Pfam Domain of unknown function (DUF3403) 827 873 IPR021820 GO:0004674
Pumo2g00938 873 Gene3D Phosphorylase Kinase; domain 1 528 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00938 Pumo-Chr2 14067715 14073998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00938 542 873 Receptor kinase-like Gene Family AT4G11530 59.050 8.55e-135 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g00938 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00938 - - gmx:100797331 1550.8