Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g00938 | ATGAAATCAAACTATTATTTCTCTTCCTCACCAAACACTTCATCAACTCTCTCTCTCTCTCTCTTTTACGTTTGCTCTGCAAACATGCCAGGTTTCAATTTCTTCCTCTTTTGCTTCTTGGCATCGTCACACATCACAATTTCATTCTCCGCAGACACCTTAACCTCAACACAAATTCTTCTAACCAACCAAACCCTCGTATCACGAAGCCAAGTCTTCGCTCTAGGCTTCTTTTCCGGGACCAATTCCACTTGGTACTTAGGCATATGGTACAACAACATCAAAGACAGAACCGTAGTATGGGTGGCCAACAGAGACAACCCTCTCGAGAACTCCACAGGATTTCTAACCATCGGAGAAAACGGAAACATAGTTCTCAGGAATCCATCAGGGAAGAACAAGAACCCCGTTTGGTCCTCGAACGAAACCAAAGCCAACAACCCCGTCCTTCAGCTTTTGGACACAGGAAACCTTGTTCTCAGAGAAGCAAACATAACCGACCCTACAAAGTATCTCTGGCAAAGCTTCGATTACCCAACAGACACACTCTTACCCGGCATGAAAATGGGGTGGAACTTAGACACGGGCGTGGAGAAACACCTAACATCGTGGCAAAACACAGGGAGAGACCCTTCAAGTGGAGACTACTCTTTCAAGATAGACACTCGTGGAATACCAGAAATTTTCTTATGGGATGACCAGAACATAATATACAGAAGTGGCCCTTGGAATGGTGAGAGATTCGGTGGGGTGCCAGAGATGCAACCGGATACGGATTCAATTAGGTTTAATTTTTCTTATGATAACCATGGTGTGTACTATTCGTTCTCCATTGGGAACCGTTCTATTTTGTCGAGGCTAGTTGTGACTTCGGGTGGTGAACTTCAGCGTCTTACCTGGGTGCCAAGTAGCAACACTTGGACCAAGTTTTGGTACGCGCGTAAGGATCAGTGTGATGGTTACAGAGCGTGTGGTCCTTATGGCTTGTGTGACTCTAACGCTTCTCCGGTTTGCACGTGTATGGGAGGGTTCAGGCCGAGGAACCAGCAGGCGTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGATTTGGATTGTGGGAGTGACAAGTTTTTGCGTGTGAAGAACGTGAAGCTGCCAGAGACAACCTTTGTGTTCTCGAACAGAAGCATGAACCTAGGCAAGTGTGAGGATCTGTGCCGCACGAATTGTTCTTGCACGGCTTATGCCAACATTGAAATCACAAACGGTGGAAGCGGGTGCGTGACGTGGAGTGGTGAACTCTTCGACATGAGGCTGTATCCTGCGGGTGGACAAGATCTCTATGTTAGATTAGCAGCTTCTGACGTAGATGACATAGGATCTGGAGGTGTCTCTCACAAGACAAACCATACAGGTGAGGCTGTAGGAATTACAATTTCTGCAGCTGTAATAATTTTGGGATTGGTTGTCATTTTCTGGAAGAAGAGGAAACTGTTAAGTATATCGAATGTGAAGACAGACCCTAGAGGTTCTTTCCAAAGAAGTCGGGATTCGATAATGAGTGAGAGGATGTTTTCAACTAATAGACAAAATTCAGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCCACAGACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAGGGGAAGGTTGATGGAAGGCCAAGAAATTGCTGTCAAGAGGTTATCAAAAAATTCCGGGCAAGGAGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGTCAGGCTTCAACATCGAAATCTTGTTCGGCTCTTTGGTTGCTGCATTGAGATGGATGAGAAGTTGCTAGTGTATGAGTACATGGAAAACAGAAGCCTTGATTCAATTTTATTCGACAAAGCCAAAAAACCCATATTGGACTGGAAAAGCCGCTTCAACATTATATGTGGCATAGCTAGAGGGCTACTTTATCTGCACCATGATTCCAGATTCAGGATTATTCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAGTGAAATGAACCCAAAAATATCAGACTTTGGGATGGCTAGACTTTTTGGCTCAAATCAGACAGAAGCAAACACATTGAGAATTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGACGGGAACTTCTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTCTAGTGCTGGAAATTATAACTGGGAAGAAAAATAGAGGATTCTATTACTCAAATGATGATATGAATCTTCTAGGGAATGCATGGAAGCAGTGGAGAGATGGCAGTGCATTGGAACTCATTGATTCATCCATTGGCGATTCATATTCACCATCTGAAGTTCTTAGATGCATACACGTTGGACTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGTCTTCAGTGATGTTGATGTTGAGTAGTGAATCTGCATTAATGCCACAACCCAGAAACCCTGGGTTTTCCATAGGGAAGAATCCTGCAGAGACTGATTCTTCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTACTAGATGCTAGGTAA | 2622 | 0.4359 | MKSNYYFSSSPNTSSTLSLSLFYVCSANMPGFNFFLFCFLASSHITISFSADTLTSTQILLTNQTLVSRSQVFALGFFSGTNSTWYLGIWYNNIKDRTVVWVANRDNPLENSTGFLTIGENGNIVLRNPSGKNKNPVWSSNETKANNPVLQLLDTGNLVLREANITDPTKYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWQNTGRDPSSGDYSFKIDTRGIPEIFLWDDQNIIYRSGPWNGERFGGVPEMQPDTDSIRFNFSYDNHGVYYSFSIGNRSILSRLVVTSGGELQRLTWVPSSNTWTKFWYARKDQCDGYRACGPYGLCDSNASPVCTCMGGFRPRNQQAWNLRDGSDGCVRNTDLDCGSDKFLRVKNVKLPETTFVFSNRSMNLGKCEDLCRTNCSCTAYANIEITNGGSGCVTWSGELFDMRLYPAGGQDLYVRLAASDVDDIGSGGVSHKTNHTGEAVGITISAAVIILGLVVIFWKKRKLLSISNVKTDPRGSFQRSRDSIMSERMFSTNRQNSGERNMDDIELPMFDFNTITMATDNFSEANKLGQGGFGIVYRGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVRLQHRNLVRLFGCCIEMDEKLLVYEYMENRSLDSILFDKAKKPILDWKSRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFGSNQTEANTLRIVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNDDMNLLGNAWKQWRDGSALELIDSSIGDSYSPSEVLRCIHVGLLCVQERAEDRPTMSSVMLMLSSESALMPQPRNPGFSIGKNPAETDSSSSKQDESWSVNQVTVTLLDAR | 873 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g00938 | 873 | SMART | serkin_6 | 554 | 832 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00938 | 873 | PIRSF | SRK | 25 | 873 | IPR024171 | GO:0004674 | |
Pumo2g00938 | 873 | Gene3D | - | 46 | 176 | IPR036426 | - | |
Pumo2g00938 | 873 | Pfam | PAN-like domain | 369 | 434 | IPR003609 | - | |
Pumo2g00938 | 873 | Gene3D | Transferase(Phosphotransferase) domain 1 | 630 | 834 | - | - | |
Pumo2g00938 | 873 | MobiDBLite | consensus disorder prediction | 832 | 862 | - | - | |
Pumo2g00938 | 873 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 37 | 816 | - | - | |
Pumo2g00938 | 873 | ProSitePatterns | Protein kinases ATP-binding region signature. | 560 | 582 | IPR017441 | GO:0005524 | |
Pumo2g00938 | 873 | Pfam | Protein tyrosine and serine/threonine kinase | 557 | 822 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo2g00938 | 873 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 98 | 245 | IPR036426 | - | |
Pumo2g00938 | 873 | SUPERFAMILY | Protein kinase-like (PK-like) | 530 | 825 | IPR011009 | - | |
Pumo2g00938 | 873 | ProSiteProfiles | PAN/Apple domain profile. | 369 | 449 | IPR003609 | - | |
Pumo2g00938 | 873 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 47 | 176 | - | - | |
Pumo2g00938 | 873 | CDD | B_lectin | 57 | 179 | IPR001480 | - | |
Pumo2g00938 | 873 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 518 | 629 | - | - | |
Pumo2g00938 | 873 | ProSiteProfiles | Bulb-type lectin domain profile. | 51 | 173 | IPR001480 | - | |
Pumo2g00938 | 873 | CDD | STKc_IRAK | 560 | 825 | - | - | |
Pumo2g00938 | 873 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 675 | 687 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo2g00938 | 873 | MobiDBLite | consensus disorder prediction | 844 | 862 | - | - | |
Pumo2g00938 | 873 | SMART | ntp_6 | 369 | 448 | IPR003609 | - | |
Pumo2g00938 | 873 | Pfam | S-locus glycoprotein domain | 238 | 347 | IPR000858 | GO:0048544 | |
Pumo2g00938 | 873 | Pfam | D-mannose binding lectin | 98 | 205 | IPR001480 | - | |
Pumo2g00938 | 873 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 630 | 833 | - | - | |
Pumo2g00938 | 873 | CDD | PAN_AP_plant | 365 | 449 | - | - | |
Pumo2g00938 | 873 | SMART | blect_4 | 57 | 179 | IPR001480 | - | |
Pumo2g00938 | 873 | ProSiteProfiles | Protein kinase domain profile. | 554 | 831 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00938 | 873 | Pfam | Domain of unknown function (DUF3403) | 827 | 873 | IPR021820 | GO:0004674 | |
Pumo2g00938 | 873 | Gene3D | Phosphorylase Kinase; domain 1 | 528 | 629 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g00938 | Pumo-Chr2 | 14067715 | 14073998 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g00938 | 542 | 873 | Receptor kinase-like Gene Family | AT4G11530 | 59.050 | 8.55e-135 | 416 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo2g00938 | PK_Tyr_Ser-Thr | 1.7e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g00938 | - | - | gmx:100797331 | 1550.8 |