Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00929 ATGAAGAAGTGCGAGCTCTGTAACAGCCCCGCAAAGTTGTTCTGTGAATCAGATCAAGCCAGCCTCTGTTGGGAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCACTAACGGCGTGGCACGGCACAGGACCCAAGTTTGTACCCACCATGTCCGTTTGCAACACTTGTGTTAACAACAATAGTCAGACCTGCAGCCAACAGAATCATGATGATGATGATAGCAACGACGATGACGATGATGATCACGATGATGATGATGGCACAGGGGAGGATCATGTAGGAAACGATGACGGTGGTGTGGCTGAAGATGATGAAGAAAATCAAGTGGTTCCATGGACATCTACACCACCACCCCCAGCTTCCACTTCTTCAAATAGTACTGTTGCAACTAGTTCCACCAGGTTCTCTAATGTTGAAGATGGTGGCTCTGATTAA 483 0.472 MKKCELCNSPAKLFCESDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTAWHGTGPKFVPTMSVCNTCVNNNSQTCSQQNHDDDDSNDDDDDDHDDDDGTGEDHVGNDDGGVAEDDEENQVVPWTSTPPPPASTSSNSTVATSSTRFSNVEDGGSD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00929 160 MobiDBLite consensus disorder prediction 87 103 - -
Pumo2g00929 160 CDD Bbox1_BBX-like 3 45 - -
Pumo2g00929 160 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Pumo2g00929 160 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pumo2g00929 160 MobiDBLite consensus disorder prediction 135 160 - -
Pumo2g00929 160 MobiDBLite consensus disorder prediction 79 160 - -
Pumo2g00929 160 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 148 - -
Pumo2g00929 160 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00929 Pumo-Chr2 13924033 13924973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00929 2 105 C2C2-CO-like Transcription Factor Family AT4G27310 48.214 8.80e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo2g00929 zf-B_box 5.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00929 - - gmx:100805832 240.736