Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00926 ATGGAGTTTGATCTTGAAGACCCACTAGTCAGCTTGGAAGAAGAGCAAACCTTTACTATATCAGAACTCTTTGCCTCCGAATCTGAACACATGCCCTCACAAAACTGCTCAAGTTCAACACATTTTCACGTTTTCTGTTGTGAAGCCATATCTCTCATTCTTCAGGTTCAGCATTCTTGCAAATTGGACCAATTTGTAGCTTATCTTGCTATAAATTACTTGCACCGTTTCATGTCAAGCCAAGAAATTCCGCAGCGCAAGCCGTGGTTTCTCAGGCTTGTTGTCATATCATGTCTTTCTCTTGCTTCAAAGATGAAGAACACAACTATATCATTCTTGGATATGCAGAAAGAAGATTGTAACTTTAAGGTTCAGAGTATTCAGAGAATGGAGCTTCTTATTCTTGGGGCTCTGAAATGGCGTATGAGGTCAATTACGCCTTTTTCTTTCCTTCATTTCTTTATCTCTTTAGCTGAAATTAAAGACCAATCAATGAAGCAAGCACTTAAAGAGAGAGCTTCAGAGATAATCTTCAATGCTCAAAATGACATTAATCTTTTAGAGTATAAACCTTCAACAATTGCAGCAACTGCCCTTATCGCTGCATCTCATGAGCTATTCCCACAGCAATATTCTACTCTGAGAGCTTCAATTACAGCATGTGAGTACCTAGATGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATGAGAATGGAAGCAAAGAAGTTAATGATAGATACAAGCTTTTTAAGCACAGAAACTCCAGTGAGTGTGTTGCAGAGAAACACCAAACGACAAAGAATTTAA 819 0.3858 MEFDLEDPLVSLEEEQTFTISELFASESEHMPSQNCSSSTHFHVFCCEAISLILQVQHSCKLDQFVAYLAINYLHRFMSSQEIPQRKPWFLRLVVISCLSLASKMKNTTISFLDMQKEDCNFKVQSIQRMELLILGALKWRMRSITPFSFLHFFISLAEIKDQSMKQALKERASEIIFNAQNDINLLEYKPSTIAATALIAASHELFPQQYSTLRASITACEYLDEETLSKCFDLMQEMMRMEAKKLMIDTSFLSTETPVSVLQRNTKRQRI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00926 272 Pfam Cyclin, N-terminal domain 26 142 IPR006671 -
Pumo2g00926 272 SMART cyclin_7 51 136 IPR013763 -
Pumo2g00926 272 FunFam D6-type cyclin 30 139 - -
Pumo2g00926 272 CDD CYCLIN_AtCycD-like_rpt2 145 236 - -
Pumo2g00926 272 Gene3D - 33 143 - -
Pumo2g00926 272 PANTHER CYCLINS 50 241 IPR039361 -
Pumo2g00926 272 SUPERFAMILY Cyclin-like 19 142 IPR036915 -
Pumo2g00926 272 SMART Cyclin_C_2 145 262 IPR004367 -
Pumo2g00926 272 FunFam D6-type cyclin 140 234 - -
Pumo2g00926 272 Pfam Cyclin, C-terminal domain 145 246 IPR004367 -
Pumo2g00926 272 Gene3D - 22 234 - -
Pumo2g00926 272 SUPERFAMILY Cyclin-like 126 245 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00926 Pumo-Chr2 13905559 13907289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00926 1 265 Core Cell Cycle Gene Families AT4G03270 41.637 1.42e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00926 K18812 - gmx:100799985 471.085