Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00922 ATGGCAAAAAAATCGAATCCGGCAGAGGGAGAAGAAGCGGTGCCGGAGCACCTGCGGTGCAGCCGTACCGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTGATGGAAAACCTAAAGCTTTGCGAGATTCACTATCTGCAAGCTCGGCGTCGGCAGCACAAGAAGAAGGTTCGGGAGTCGCTGAAGCTTAAGAGAAAGAGGCAAAACGACGCCGTTGAGGTTCAGATTGGGGCGAAGAGGAAGCGAAAATCCGAAGAGGCGTTGGCGAATAGGAGGAAGCAATTGGAGCTCATAAGAATGGTTCTACAGAGAGAGGTTGAGAAGAAGAAGAAGAGGGAAGCGCAATTGAATTTGAATTTGAATTTGCATTTGCATTCCAATCACGAGTTGAGGAAGGAACTGCCGAATGGGGTTATGGCTATTGCGTCCAATGTGGCTTCTTCTCGTTACTTCAGGTCCAAGAATGCTGAGAGGGGCTCTGTTAGTAAGTTGCAGGTTGTGCAGTGTGGACAAAACATGAAGAAGGGGAGGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGATTCTTGGAATCTGATAAGGTGTTCAAGCTGCCAGAGAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTTGATACTCAAAATGAGGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCACCTGTAAAGATTGCTTGGCAAATCAATACGAAGACAGTGAAAGTAAGGAATATTTGGCTGGTAAAACCAGAGTTGGTAGGATATTGCATTTTCATTATTTGGTCTGCATGCTCCTTCCTGTACTAAAACAAATAAAAGACGACCACCATGTGGACGTAGAAACAAAAGCAAATATTAAAGGGAAAAGAATTTCTGATATTCTCATCAAGCCGGTCGATTTTGGCTGCAACGAGAAAAATTACTGCAATTACTGCAAAACACCCATTTTGGATCTTCATAGAAGCTGCCTTAGTTGTTCCTACAGCCTTTGCTTAAATTGTTCTCAGGCATTAAGTCAAGGAAGCACCTCTGAAGAAATCAACTCTTCTATATCCAAGCTGCCTGACAAAATAAATGCTTGCATTTCTAGCGAAAGTCACCTTTTGGATGATAAGGTCAATTCTAATGGCAATTTAACTGATACCTCAACATTACCTGAGTGGACAAATTGTAATGGTGCTGACATTGTGTCATGCCCACCTACAAAGCTTGGTGATTGTGGTGATAGCCACCTTGATTTGAAATATGTTTTTCCCTTAAGTTGGATCAAAGAAATGGAAGTAAAGGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGCTGCTCACTGTGTGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGTTACAGGAAGCAGCTCAAAGAGAAGATTCTAATGATAATTCCTTATTTTATCCTACAGTTTTGGACATCAGTTGCAATCATTTTGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTAGTAGTGCGAGATGTTCTTCAAAGTACACCAAACCTTAGTTGGGATCCACTCTTTCTGTTCTGTACTTATCTTGAGAGGAGCATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTTTGAGGTGGAGATTAACGTTAGGCAGTATTTTACTGGGTCTCTTAAATGTCAACCTCTGAAAAATACTTGGCATGAGATGCTGAAACTTAAAGGATGGTTGTCTTCACAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGATGCTCTTCCAATTCAAGAATACATGAATCCCTTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCACAGGGGAGTACAAAACATGACATAGGACCATATGTTTATATTTCATATGGCTGTGCTGACGAAGAAGCTGATTCCGTGACAAATCTCTGTTACGACTCATATGACATGGTTAATATTATGGCACATACCATGGACATCCCTCTCTCTACAGATCAGCTTGCTAAAATAAGTAAGCTATTGAAAAAACACAAAGCTCTATGTCAAAAGGTGTCATCTAAAACTACTAGTGAGCATTCAGAAGACAGGGAACAAAATGAAATGCATAGTATGGTAAGAGAAGGAACTGACTTTTTAAGGAGAGTCAATAGAACATCTTGCATCTCTACTGAGGCCAAAATGATATCTAATCAGAATTTAGACACCAATATTTCTGGTGATGAAGAATGTGGTTCCGATTCTGAAACTGAAAAGGCACAAAGCTCTTTACCCTTCCACAGGACAGTTCTAAGCACTGAAATGTCTCCAGATCATAATCCTAGAAATCCCTTTGAAAACTCAAACAGTGATAAAAGGAAGAAGTTTACTGAGAATTCTGGTGCTCATTGGGATGTCTTTCGAAGACAGGATGTACCCAAGCTCTTAGAATACCTTAAAAGACACTCTGATGAATTTTCTTATACTAGTGAACATCACGAGAAGATGGTTCATCCAATTCTGGATCAGAGCTTCTTTCTTGACAATACTCACAAGATGAGACTTAAGGAGGAGTTTAAAATTGAACCTTGGACTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTTCTGGATGTCCATACCAGATTAGGAATCCTAAGTGTTGTGTACATGTGGAATTGGAATTTGTGTCTCCTGAGAATGTCTCTGAGTGCATCCAATTGATTGATGAGGTCCGGCTGCTTCCAGAAGACCATAAAGCGAAAGTAGAAAAGCTGGAGGTGAAAAAAATGGCCCTTTATAGCATGAGTACAGCAATAAAAGAAATACGTGAGCTTACATGCAAAACATGA 2868 0.4076 MAKKSNPAEGEEAVPEHLRCSRTDGRQWRCRRRVMENLKLCEIHYLQARRRQHKKKVRESLKLKRKRQNDAVEVQIGAKRKRKSEEALANRRKQLELIRMVLQREVEKKKKREAQLNLNLNLHLHSNHELRKELPNGVMAIASNVASSRYFRSKNAERGSVSKLQVVQCGQNMKKGRRKKCHWCQRSDSWNLIRCSSCQREFFCMDCIKQRYFDTQNEVKMACPVCRGTCTCKDCLANQYEDSESKEYLAGKTRVGRILHFHYLVCMLLPVLKQIKDDHHVDVETKANIKGKRISDILIKPVDFGCNEKNYCNYCKTPILDLHRSCLSCSYSLCLNCSQALSQGSTSEEINSSISKLPDKINACISSESHLLDDKVNSNGNLTDTSTLPEWTNCNGADIVSCPPTKLGDCGDSHLDLKYVFPLSWIKEMEVKAEEIVCSYDFPETLDKSSSCSLCVDKDHKTSRYKQLQEAAQREDSNDNSLFYPTVLDISCNHFEHFQKHWGKGHPVVVRDVLQSTPNLSWDPLFLFCTYLERSMTRYENNKDLLEACLDWFEVEINVRQYFTGSLKCQPLKNTWHEMLKLKGWLSSQLFKEQFPAHFAEVIDALPIQEYMNPLSGLLNLAANLPQGSTKHDIGPYVYISYGCADEEADSVTNLCYDSYDMVNIMAHTMDIPLSTDQLAKISKLLKKHKALCQKVSSKTTSEHSEDREQNEMHSMVREGTDFLRRVNRTSCISTEAKMISNQNLDTNISGDEECGSDSETEKAQSSLPFHRTVLSTEMSPDHNPRNPFENSNSDKRKKFTENSGAHWDVFRRQDVPKLLEYLKRHSDEFSYTSEHHEKMVHPILDQSFFLDNTHKMRLKEEFKIEPWTFEQHVGEAVIIPSGCPYQIRNPKCCVHVELEFVSPENVSECIQLIDEVRLLPEDHKAKVEKLEVKKMALYSMSTAIKEIRELTCKT 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00922 955 ProSiteProfiles JmjC domain profile. 614 918 IPR003347 -
Pumo2g00922 955 MobiDBLite consensus disorder prediction 746 800 - -
Pumo2g00922 955 ProSiteProfiles Zinc finger RING-type profile. 181 227 IPR001841 -
Pumo2g00922 955 Pfam WRC 15 56 IPR014977 -
Pumo2g00922 955 Coils Coil 92 119 - -
Pumo2g00922 955 ProSiteProfiles WRC domain profile. 14 58 IPR014977 -
Pumo2g00922 955 SUPERFAMILY Clavaminate synthase-like 489 938 - -
Pumo2g00922 955 Gene3D Cupin 486 927 - -
Pumo2g00922 955 SMART cupin_9 595 918 IPR003347 -
Pumo2g00922 955 MobiDBLite consensus disorder prediction 761 788 - -
Pumo2g00922 955 Pfam JmjC domain, hydroxylase 804 901 IPR003347 -
Pumo2g00922 955 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 953 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00922 Pumo-Chr2 13863112 13869227 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pumo2g00922 JmjC 1.1e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00922 K15601 - gmx:100802129 1786.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01806 6 27922773 27928871 Pumo2g00922 2 13863112 13869227 PCT