Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00915 ATGCCATTTTACAAAGAAGCCCAAAAGGGTATTCCGGTAAATAAGCACACAATAGTCCAACTTTCTATCAACTGCAATCTAAGGATAAGTATAGATCTGAAGTCAGAACTACATTACATTAGATTCTCTCTCTCTTTCTCCTCCGACATCGTTACTCAGATACCCCCACCTCCGAAACCAAATGGGTTTGCTCTGAGAACCAAAATGGGTGACGAACAACCGTCGACCACCGCCGGCTCCGGTCTCCGGCGAGTCATCGCGCTCATCTCTTCCCTGATCTCCCTCTCCCTCTCGATCAGAGTCTTCGCTGGAAAGTGGCAACTGATTCGGAGCAGGCTGGAGGGGCTCCACTCGGCCCTCGTCGCCGGCGATGCCACGTCACTCTCCGGCGAGCTCCCGGCGATAACAGTCACGGCGGAGGAGTGCCAGGAGCTGGCGCGGCGGTGCGTGGATCTGTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGACGTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTATCTGAGATATTCAAGAAGCGCGTGTCGATGCATGGCTACGCTGTTGTGGTTTCAAGGCCCGGTTTTGGAGCTTGCAAAGATGACATGAGGTTCTACCTGAGGGACTTGTTGACTCGAATGAAGGTTGGTGATTTGGGTATGAAGAAGCAAGCTTTGGTGAACTTGCATGAGGTGGTTGTGGAGGATGACAGGTATGTGAAGTTGGTCGTTGAGGTTTCTGAGTTTGTTCACGTCTTGGTGGATTTTCTAGGTTGTAATGAGGTTGAGGTTGTCGAGGAGGCTGCTAAGGTTGTTTCTGTGGTTGCTGGGTTTGATTCTTATAAAGGGGTTTTGGTTGGTGCTGGGGTTATTGCCCCTTTGATTCGGGTTTTGGAATGTGGGAGTGAGGTTGGGAAGGTTGGTGCTGCGAGGTGTTTGCAAAGGTTGACCGAGAATTCGGATAATGCGTGGTGTGTTTCGGCTCATGGGGGTGTTACTGCTTTGTTGAGGATTTGTGAGAGTGTGGAGTGTAAAGGGGAATTGGTTGGTCCTGCTTGTGGGGTGTTGAGGAATCTTTGTGGTGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGTGTGGTTTCCACTTTTGTGAGGCTTGTGAGGTCTAGGGATGAAGCAGTTCAGGTGAGTTCTGTTGAGTTGATTCAGAACATTGCCTCTGGTGATGAGTTGGTTAGGCAGATGGTGGTTAGAGAAGGAGGGGTTCGTGTTCTTTTGCGTGTTTTGGATCCCAAGTGGACTTGTTGGTCGAAAACAAGAGAGGTTGTGATGAGGGCTATTGAGAATTTGTGTTTCTCTTCGCCTAGTTGTGTTAGTGTTTTGCTGAGTTATGGCTTTGTGGATCAATTGATGTATTATGTGAGAAATGGGGAGGTTTTGATTCAGGAGTTGGCGCTGAAGGTGGCGTTTAGATTCTGTGAAACATCGGAGGAGGCTAAGAAGGCGTTGGGCGATGCCGGCTTCATGGCTGAGCTTGTGAAGTTTCTAAATGCGAAATCGTTTGAAGTTCGTGAAATGGCAGCAGAGGCACTCTCTGGCATGGTTATGGTGGCGAAAAATAGGAAGAGGTTTGTGCAGGATGACCAAAACATTGCTCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGGAATTCAGGTAACAAAAAGTTGTTGATCTCTATCTTGATGTCACTAACAAGTTGCAACAGTGGGAGGAAAAAAATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCTGATGCCAAGAGGCTTGTGAGGAAGCTATCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCTTGA 1893 0.4876 MPFYKEAQKGIPVNKHTIVQLSINCNLRISIDLKSELHYIRFSLSFSSDIVTQIPPPPKPNGFALRTKMGDEQPSTTAGSGLRRVIALISSLISLSLSIRVFAGKWQLIRSRLEGLHSALVAGDATSLSGELPAITVTAEECQELARRCVDLSYSGKLLMQSDLDVTLGKLEAHVKKLSEIFKKRVSMHGYAVVVSRPGFGACKDDMRFYLRDLLTRMKVGDLGMKKQALVNLHEVVVEDDRYVKLVVEVSEFVHVLVDFLGCNEVEVVEEAAKVVSVVAGFDSYKGVLVGAGVIAPLIRVLECGSEVGKVGAARCLQRLTENSDNAWCVSAHGGVTALLRICESVECKGELVGPACGVLRNLCGVEEIKRFMVEEGVVSTFVRLVRSRDEAVQVSSVELIQNIASGDELVRQMVVREGGVRVLLRVLDPKWTCWSKTREVVMRAIENLCFSSPSCVSVLLSYGFVDQLMYYVRNGEVLIQELALKVAFRFCETSEEAKKALGDAGFMAELVKFLNAKSFEVREMAAEALSGMVMVAKNRKRFVQDDQNIALLLQLLDPGEGNSGNKKLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00915 630 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 334 378 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 495 535 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 366 406 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 323 365 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 240 281 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 408 451 IPR000225 GO:0005515
Pumo2g00915 630 SMART arm_5 282 322 IPR000225 GO:0005515
Pumo2g00915 630 Gene3D - 211 619 IPR011989 -
Pumo2g00915 630 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 75 629 - -
Pumo2g00915 630 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 377 420 IPR000225 GO:0005515
Pumo2g00915 630 SUPERFAMILY ARM repeat 212 612 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00915 Pumo-Chr2 13801188 13803342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00915 182 484 U-box Gene Family AT2G23140 24.104 5.79e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00915 - - gmx:100783537 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01811 6 28063342 28065892 Pumo2g00915 2 13801188 13803342 PCT