Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00914 ATGGTGAGAGTGTTGCACCTGAAGAGGCAGTTACCGAGAAGAAAAAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCGACAAGTTTTTTGAAGAATTTGAACAATCCTAAATATGAGGTTCAAGTAGTTTCGCCTCGTAACTACTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGGACCGTCGAAGCGCGCAGCATTGTTGAGCCAGTTCGCAATATTCGTAACAAGAAGAAGGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTGTGAACAATAATTTGAATGGGAAAGAAGAATTTGTTGTGGATTATGACTACCTAATAGTCGCGGTGGGCGCTAATGTCAATACATTTAATACTCCAGGAGTGACGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCTCAAAAAATTAGAAGAACAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATGTTAGTGAAGATGAGAAGAAAAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTGGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGGTCCGTTTATATCCTGGGATAAAAGATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGCGAATCACTGCTTTTGCTGAAGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCTGAGAAAGAAATTTCCACTAAAGAACTGAAAAATGGAGGAGAGATTAAGACAATTCCGTATGGAATGGCAGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTTATGATACAAATCGGTCAGGCTAGCAGGCGTGCTCTAGCTACAGACGAATGGTTGAGAGTTGAAGGGTGCAACAATGTGTATGCGCTCGGTGATTGTGCTACGATAAACCAGCGAAAAGTCATGGAAGATATTGCGGCGATCTTTAAGAAGGCTGACAAAGACAATTCTGGAACACTTACAGTGAAAGAATTTCAAGAGGTCATGAAAGATATCTATGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGAGCAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATAAAAAAGAATCAATTGAACTGAATATCGAAGAACTCAAAACAGCACTTTCCAAAGTGGATTCTCAGATGAAATTTCTTCCTGCTACAGCCCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGATGGAAGAGTGTGAAAAAAATCCAGATGGTCCTCTCAGATTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGCCAATTTGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTACGCAAGCTTCAATCAATCCTTTGAACAGCAAGCAAGTAAGCTGGCGTACAAGAGCCTTAGTAGTTTCAGACTGGACAAGACGCTTTATTTTTGGAAGGGACTCAAGTAG 1638 0.4212 MVRVLHLKRQLPRRKKVVVLGTGWAATSFLKNLNNPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIRNKKKVDVQFSEAECFKIDAENRKVYCRSSVNNNLNGKEEFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAGDHILGMFDKRITAFAEDKFQRDGIDVKTGSMVVKVSEKEISTKELKNGGEIKTIPYGMAVWSTGIGTRPFIKDFMIQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVMKDIYERYPQVELYLKNKQMSNIADLLKEAKGDDKKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPDGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASFNQSFEQQASKLAYKSLSSFRLDKTLYFWKGLK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00914 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Pumo2g00914 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 120 138 - -
Pumo2g00914 545 ProSiteProfiles EF-hand calcium-binding domain profile. 338 373 IPR002048 GO:0005509
Pumo2g00914 545 PANTHER NADH DEHYDROGENASE 10 521 IPR045024 GO:0003954|GO:0006116
Pumo2g00914 545 SUPERFAMILY EF-hand 332 427 IPR011992 -
Pumo2g00914 545 CDD EFh 342 417 IPR002048 GO:0005509
Pumo2g00914 545 SUPERFAMILY FAD/NAD(P)-binding domain 181 335 IPR036188 -
Pumo2g00914 545 Coils Coil 402 422 - -
Pumo2g00914 545 Pfam EF hand 343 369 IPR002048 GO:0005509
Pumo2g00914 545 SUPERFAMILY FAD/NAD(P)-binding domain 14 233 IPR036188 -
Pumo2g00914 545 ProSitePatterns EF-hand calcium-binding domain. 351 363 IPR018247 -
Pumo2g00914 545 Gene3D - 4 385 - -
Pumo2g00914 545 Gene3D - 386 526 - -
Pumo2g00914 545 SMART efh_1 342 370 IPR002048 GO:0005509
Pumo2g00914 545 Pfam Pyridine nucleotide-disulphide oxidoreductase 15 341 IPR023753 GO:0016491
Pumo2g00914 545 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 6 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00914 Pumo-Chr2 13786234 13792321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00914 13 512 Chloroplast and Mitochondria Gene Families AT4G21490 76.647 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00914 K03885 - gmx:100797657 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g01813 6 28106756 28112257 Pumo2g00914 2 13786234 13792321 PCT