Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00888 ATGTCAAATTCCATCAGAGTTTATACTGTTGCATTGCTTCAACAATATACAAATAGCTTTTCCCAAGAGAACTGTATTGGGGAAGGTACACTTGGGCCTGTTTATCGGGCTGAGCTCCCTGATGGAAAGCTATTGGCAGTGAGGAAATTGGATGCTACTGCTTCCATGGGTCAGAGTCATGAACAATTTCTTCAATTGGTGTCCAGCATCTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTGCTGAGCATAGCCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACCCTACATGATGCACTGCATGGGGATGACGATCACCGTATCAAACTTCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAGCGACAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTACTATCTTCTGGCTCTACTGGTCAGTTATCAGGACGCCTCCTTACAGCCTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTCCTCACTAGACGAAAATCTTATGACAAGTCACGGCCTCGTGGAGAGCAATTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCGTTGTCCAAAATGGTTGACCCCTGCTTAAACGGAGCCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTGTACAGCGTGAACCTGAATTCCGGCCAGCAATGTCGGAAATTGTTCAAGATCTGTTGCGAATGATGTAA 897 0.4415 MSNSIRVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHSQRLLVYEYCSNGTLHDALHGDDDHRIKLPWNARIQVALGAARALEYLHENFQPPIVHRNFRSANVLLSDNLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTRRKSYDKSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLNGAYPMKSLSRFADIVSSCVQREPEFRPAMSEIVQDLLRMM 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00888 298 SUPERFAMILY Protein kinase-like (PK-like) 4 294 IPR011009 -
Pumo2g00888 298 Gene3D Transferase(Phosphotransferase) domain 1 98 298 - -
Pumo2g00888 298 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 98 298 - -
Pumo2g00888 298 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 1 97 - -
Pumo2g00888 298 PANTHER OS01G0253100 PROTEIN 5 295 - -
Pumo2g00888 298 ProSiteProfiles Protein kinase domain profile. 20 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00888 298 PIRSF ILK 8 298 - -
Pumo2g00888 298 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Pumo2g00888 298 Pfam Protein tyrosine and serine/threonine kinase 23 294 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00888 Pumo-Chr2 13555593 13559442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00888 4 298 Strubbelig Receptor Gene Family AT4G03390 70.847 5.10e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo2g00888 PK_Tyr_Ser-Thr 7.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00888 - - gmx:100793423 549.666