Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00886 ATGGGTAACATTAAATTGGAGTTGCATGTTGGAATTTTTGTCACCTGCATGGTGATTCTCACAGGGACTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCAGCGATAAATAGTCTGTATGTTTCTCTGGGGTCGCCACCACTTCAAGGGTGGAAACCCGTGGGAGGAGATCCATGTTTAGAACTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCATATTCCATTTACTTTGCCCCCTACTCTGAGGAGCTTGTCTCTCTCAGCAAATCGGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCTTCAACTGGGAGTTTATCATCTCTTACCACATTGCACTTGCAAAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAAGACCCGCCTCTTCAAGATCTGAATATAGAGAACAATTTATTCTCTGGGCCAATTCCTCCAAAATTGTTGACTATCCCTAATTTCAGTAAAAATGGGAATCCATTTAATACTACTATTATTCCATCACCTCCTGCTGCTGCCCCTGCACCCATAGCTATGGCTCCATCTCCCCAAGAATCCCCTTGGAAAGAGGCACATGGTCCTTCTGCCCTGCCAGCACCAGTGCCTGCTAGGTACTAG 795 0.444 MGNIKLELHVGIFVTCMVILTGTFCVGDTDMVDVAAINSLYVSLGSPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSIIELDLSNNHIEGHIPFTLPPTLRSLSLSANRLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLFVLQDPPLQDLNIENNLFSGPIPPKLLTIPNFSKNGNPFNTTIIPSPPAAAPAPIAMAPSPQESPWKEAHGPSALPAPVPARY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00886 264 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 143 231 - -
Pumo2g00886 264 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Pumo2g00886 264 MobiDBLite consensus disorder prediction 231 264 - -
Pumo2g00886 264 SUPERFAMILY L domain-like 34 210 - -
Pumo2g00886 264 Gene3D Ribonuclease Inhibitor 33 229 IPR032675 -
Pumo2g00886 264 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 142 - -
Pumo2g00886 264 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 221 IPR046959 -
Pumo2g00886 264 PRINTS Leucine-rich repeat signature 164 177 - -
Pumo2g00886 264 PRINTS Leucine-rich repeat signature 143 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00886 Pumo-Chr2 13552212 13555128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00886 33 242 Strubbelig Receptor Gene Family AT4G03390 51.681 5.51e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00886 - - gmx:100793423 427.943