Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00827 ATGGGGGAAGATGGTAATTCTTGGATTAGGAGGACAAAGTTTTCACACACAGTGTGCCATCGTTTAGATCCTTCTAGATTAGGCTCTATTCCTATCAGTGTTCAGTCAGAGCAAAAATCAAGGCCTGCCTCAAAGGTTCAGAGACACCCCATAACCAACAAGCAGAGATCTTTGTCACCATTGCCTGAGACTTTTCTTTCTGAGGCCTTCAGGGAAGCTAGACATGAACAGAAGAGGTTCTCCACTCCGAATCCCCGGAGGGATAAGAGGATTATGGGGAAGTTGTTGAACAAAGATTCTAGGGCGACTAAGGAATCAAGTTCAAAGTCACCTTCCCGTAGTCCTAATAGGCAAGTGAAGTCGAAGCACCGCAAGGATTCAGCATGGACTAAGCTCTTGGACAATGGTGGAGGAAAGATTACTGCTGTGGAAACAGCTGAAGAGTGGAATGTTGACATGTCTCAATTGTTTTTTGGCCTAAAGTTTGCTCATGGGGCACATAGTCGACTTTACCATGGTGTATATAAGGATGAGGCTGTTGCTGTTAAAATCATTATGGTACCTGAGGATGATGAAAGTGGAGATTTGGCTTCTAAATTAGAGAAACAGTTCATTAGAGAAGTCACCCTTTTATCTCGTCTTCATCATCCAAATGTTATAAAGTTCTCAGCAGCATGCAGAAAACCACCAGTTTATTGTATTATCACAGAATATCTGGCGGAAGGTTCCTTGAGGGCATATTTGCATAAATTGGAACACCAAACTATTTCTCTAGAAAAGCTAATAGCTTTTGCTCTGGATATTGCTCGCGGAATGGAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATCAATGAAGACTATCACCTTAAAATTGCCGATTTTGGCATCGCGTGTGAGGAAGCATCTTGTGACTTATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCTGAGATGATCAAAAGGAAATCCTATGGGAGAAAGGTTGATGTCTACAGTTTTGGGCTTATCTTATGGGAGATGTTGACTGGAACGATACCATATGAGGATATGAATCCAATACAGGCTGCTTTTGCGGTAGTAAATAAGAATTCAAGACCAGTTATTCCATCAGACTGCCCTCCTGCAATGCGAGCTCTAATTGAGCAATGTTGGAGCTTGCAACCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTATTAGAGCAATTTGAATCTTCACTTGCCCGTGATGGAACCTTGACTCTGGTGCCAAACCCTTGTTGGGATAACAAGAAGGGGCTTCTTCATTGGATACAAAAGCTTGGTCCCTTGCACCAAAATAGTGGCCCTGTGCCTAAACCCAAATTCACATGA 1389 0.4312 MGEDGNSWIRRTKFSHTVCHRLDPSRLGSIPISVQSEQKSRPASKVQRHPITNKQRSLSPLPETFLSEAFREARHEQKRFSTPNPRRDKRIMGKLLNKDSRATKESSSKSPSRSPNRQVKSKHRKDSAWTKLLDNGGGKITAVETAEEWNVDMSQLFFGLKFAHGAHSRLYHGVYKDEAVAVKIIMVPEDDESGDLASKLEKQFIREVTLLSRLHHPNVIKFSAACRKPPVYCIITEYLAEGSLRAYLHKLEHQTISLEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDYHLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGTIPYEDMNPIQAAFAVVNKNSRPVIPSDCPPAMRALIEQCWSLQPDKRPEFWQVVKVLEQFESSLARDGTLTLVPNPCWDNKKGLLHWIQKLGPLHQNSGPVPKPKFT 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00827 462 Pfam Protein tyrosine and serine/threonine kinase 161 412 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 MobiDBLite consensus disorder prediction 30 132 - -
Pumo2g00827 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Pumo2g00827 462 MobiDBLite consensus disorder prediction 30 62 - -
Pumo2g00827 462 Gene3D Phosphorylase Kinase; domain 1 144 239 - -
Pumo2g00827 462 ProSiteProfiles Protein kinase domain profile. 156 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00827 462 Gene3D Transferase(Phosphotransferase) domain 1 240 426 - -
Pumo2g00827 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 85 419 - -
Pumo2g00827 462 MobiDBLite consensus disorder prediction 68 106 - -
Pumo2g00827 462 FunFam Serine/threonine-protein kinase isoform 1 146 240 - -
Pumo2g00827 462 FunFam serine/threonine-protein kinase HT1 241 431 - -
Pumo2g00827 462 SMART serkin_6 156 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00827 462 PRINTS Tyrosine kinase catalytic domain signature 274 292 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 PRINTS Tyrosine kinase catalytic domain signature 236 249 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 PRINTS Tyrosine kinase catalytic domain signature 320 330 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 PRINTS Tyrosine kinase catalytic domain signature 339 361 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Pumo2g00827 462 CDD STKc_MAP3K-like 163 412 - -
Pumo2g00827 462 SUPERFAMILY Protein kinase-like (PK-like) 143 412 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00827 Pumo-Chr2 12480742 12484118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00827 1 462 MAP Kinase Kinase Kinase AT5G58950 56.464 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo2g00827 PK_Tyr_Ser-Thr 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00827 - - gmx:100500590 898.271