Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00814 ATGGAGCAAGGAGTTGGAGAAGGGGGTGATATGAACAAGCAACCTCAGGATTCGAGAGTGAAGGAGATTCAACAAGGTGATGCACAAGCTCAGGTTCAGGCTCCTCAACAACCCCAAAAGTGTCCTCGATGCGACTCTCTCAACACCAAATTTTGCTATTACAACAACTATAGCTTGTCACAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGTGGAACCTTGAGGAACGTTCCTGTTGGTGGTGGTTGCCGCAAGGGGAAGCGCGCCAAGAGTTCTAATTCATCTTCGTCGGAGAATTCTTCTTCCCGGTCACTGCCTCAACAACAGCAACCGCATGAGGTGGTGGTTCAAACTCAACCACCACCCTTAACATCGGTGGTGAGGGCTAAAGACCCTTCTTCAGTTGTGGCTTCACCCTTTTACCAAAGTGGTGGGTACTTGTCTTCTTTGGCTGCTATGCATTCACTCAACCCATCATCACACCCTTTTGATCAGTCTCTTAATGTTGCGGGTAGTGACGCCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGGCTTCAATGTTCAGCGCCCAATTGGGCCAATTCGTCCACCGCAGTTGTATCAAATGGGGAGTGGTGAAAGGGAGGTGGTGTCTCTGTATGAACAAGGTTTGGTTAATCCATCATCCAGCATGGCTAACAATACTAATACTAATAGCAGTGGTGTTTCTCAGCATGATTGGCCTCAGAGCTTCATCAATAATAATAACAATAATGCTAGTAATAGGGCCTCTGATGCCTCTATGTGGAGCACCATCAGCACCACTATTGGTGGTAACTCTGAGAGGACTAGTACTAGTACCAGTGGTGTTGGTGCTGGTTCTTCTTCTTCTTCTTTGCTCACAAATCAATGGCCTAATCTTCCAGGGTATGGCCCTCCACCATGA 942 0.4745 MEQGVGEGGDMNKQPQDSRVKEIQQGDAQAQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSSNSSSSENSSSRSLPQQQQPHEVVVQTQPPPLTSVVRAKDPSSVVASPFYQSGGYLSSLAAMHSLNPSSHPFDQSLNVAGSDALRSSNLGLLSGFNVQRPIGPIRPPQLYQMGSGEREVVSLYEQGLVNPSSSMANNTNTNSSGVSQHDWPQSFINNNNNNASNRASDASMWSTISTTIGGNSERTSTSTSGVGAGSSSSSLLTNQWPNLPGYGPPP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00814 313 MobiDBLite consensus disorder prediction 83 120 - -
Pumo2g00814 313 MobiDBLite consensus disorder prediction 227 304 - -
Pumo2g00814 313 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Pumo2g00814 313 MobiDBLite consensus disorder prediction 227 313 - -
Pumo2g00814 313 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Pumo2g00814 313 MobiDBLite consensus disorder prediction 18 41 - -
Pumo2g00814 313 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Pumo2g00814 313 MobiDBLite consensus disorder prediction 1 41 - -
Pumo2g00814 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 258 IPR045174 GO:0003700|GO:0006355
Pumo2g00814 313 MobiDBLite consensus disorder prediction 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00814 Pumo-Chr2 12375034 12377276 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00814 12 101 C2C2-Dof Transcription Factor Family AT5G60200 63.333 8.63e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pumo2g00814 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00814 - - gmx:100817065 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00814 2 12375034 12377276 Pumo2g00814 2 12375034 12377276 ECH