Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00804 ATGGCGTCTTCCTCTTCAGCTTCACGCGAGGGACACTACAGAGGGGTTAGGAAGCGACCATGGGGACGCTACGCCGCCGAAATAAGAGACCCCTGGAAGAAGACACGTGTCTGGCTCGGCACATTCGATACTCCCGAGGAGGCCGCCCTCGCCTACGACGGCGCCGCCCGCTCCCTCCGCGGCGCCAAGGCCAAGACCAACTTTCCTCCGGCGCCGGCCCTCTGCCTCGACCTCAACGTCCCTTCCTCCGATCACCGCTGGCCCAACGTCCCCTCCCGCAGCCTCGTCCTCACCGAGTTTCTCCACACCGCCGTTCTCAAAGATATCGAGCCCCCACAACTACCTCTTCCACCCGCCGCCGCCGTCGTCGCTCACCGAAACGCCCACGCCGGAGCTATGGCCGTTGGCGGCGGCGTTCAGGTGGTGGAGAGTTCCCCAACGGCTTCGTTTTTGGGACTCGTTCGCCGCGGGATCCCCATCGACTTGAACGAACCTCCACCGGTGTGGCTATGA 513 0.6452 MASSSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPALCLDLNVPSSDHRWPNVPSRSLVLTEFLHTAVLKDIEPPQLPLPPAAAVVAHRNAHAGAMAVGGGVQVVESSPTASFLGLVRRGIPIDLNEPPPVWL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00804 170 SUPERFAMILY DNA-binding domain 12 69 IPR016177 GO:0003677
Pumo2g00804 170 FunFam Ethylene-responsive transcription factor 2 12 70 - -
Pumo2g00804 170 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
Pumo2g00804 170 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 Pfam AP2 domain 12 61 IPR001471 GO:0003700|GO:0006355
Pumo2g00804 170 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00804 Pumo-Chr2 12261394 12262922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00804 3 170 AP2-EREBP Transcription Factor Family AT1G28360 47.500 1.15e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo2g00804 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00804 - - gmx:100798369 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00804 2 12261394 12262922 Pumo2g00804 2 12261394 12262922 ECH