Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00791 ATGGGGATGGACTACTATGGGATTTTGGAGGTTGACAGGAATGCCACAGATGAAGAGTTGAAGAGAGCCTACAGAAAGCTTGCAATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGAGGCTGAGATTCAATTCAAACAGATATCTGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAATTTATGATCGGTATGGAGAAGGTGGCCTTAAAGGTGGAATGCCAACACCGGATGAAGGTGTGGCTTCCTTCTTCCGAACTGGGGATGGCCCAACAGCATTTAGGTTCAATCCCAGAAACGCAAACAACATTTTTGCAGAAGTGTTTGGGTGTTCAAGCCCATTTGGAGGAATGGGAATGGGGTTTGGCTGTGGTGGCAGAGGCAGAGGCATGGGCATGGGGGGCAGATCGTGGGTGTCAAGGTCCTTTGGTGGAATGTTTGGCAATGACATGTTTAGAGAAGGCAGGCCAATGAATCAAGGTCCACGCCGCAAGGCACCTCCCATTGAAAATACATTGCTTTGCAGCCTTGAGGAGCTCTACAAGGGTAATACCAGAAAGATGAAAATCTCAAGGGAAATTACACATGCAAGTGGGAGAATTTTTCCTGTGGAGGAAATATTAAACATTGAAATCCAACCGGGCTGGAAAAAGGGAACCAAAATCACTTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTCATTGCTGCAGATCTTGTGTTTATTATTGATGAGAAACCTCACAGTGTATTTACAAGAGATGGTAATGATTTGGTTGTGACACAAAAGATATCACTTACAGAAGCTGAAGCTCTAACAGGCTACACCATCCAACTTACAACTCTAGATGGCAGGGGTCTGAACATCGTCATAAACAATGTGACTAATCCAGATTATGAAGAAGTGATCACCGGGGAAGGTATGCCAATTTCCAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAATTCAACATCGAAATCCCAGACATAGTTGGTGCCTGA 1017 0.4444 MGMDYYGILEVDRNATDEELKRAYRKLAMKWHPDKNPNNKKEAEIQFKQISEAYEVLSDPQKRAIYDRYGEGGLKGGMPTPDEGVASFFRTGDGPTAFRFNPRNANNIFAEVFGCSSPFGGMGMGFGCGGRGRGMGMGGRSWVSRSFGGMFGNDMFREGRPMNQGPRRKAPPIENTLLCSLEELYKGNTRKMKISREITHASGRIFPVEEILNIEIQPGWKKGTKITFPEKGNEQPNVIAADLVFIIDEKPHSVFTRDGNDLVVTQKISLTEAEALTGYTIQLTTLDGRGLNIVINNVTNPDYEEVITGEGMPISKDPSKKGNLRIKFNIEIPDIVGA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00791 338 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pumo2g00791 338 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pumo2g00791 338 CDD DnaJ_C 171 334 - -
Pumo2g00791 338 SMART dnaj_3 3 62 IPR001623 -
Pumo2g00791 338 CDD DnaJ 4 59 IPR001623 -
Pumo2g00791 338 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 334 - -
Pumo2g00791 338 Pfam DnaJ C terminal domain 174 333 IPR002939 -
Pumo2g00791 338 Gene3D DnaJ domain 2 122 IPR036869 -
Pumo2g00791 338 FunFam Dnaj homolog subfamily b member 169 250 - -
Pumo2g00791 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 263 IPR008971 GO:0006457|GO:0051082
Pumo2g00791 338 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Pumo2g00791 338 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 335 IPR008971 GO:0006457|GO:0051082
Pumo2g00791 338 Gene3D - 172 250 - -
Pumo2g00791 338 Gene3D - 252 334 - -
Pumo2g00791 338 FunFam DnaJ subfamily B member 13 3 123 - -
Pumo2g00791 338 FunFam DnaJ subfamily B member 13 252 334 - -
Pumo2g00791 338 Pfam DnaJ domain 4 67 IPR001623 -
Pumo2g00791 338 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pumo2g00791 338 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pumo2g00791 338 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pumo2g00791 338 PRINTS DnaJ domain signature 62 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00791 Pumo-Chr2 12144909 12148017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00791 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 6.92e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00791 K09510 - gmx:100804763 607.446