Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00787 ATGCCCCTGCAACTGCTTCCTCTCTTGCTCTTCTTCAGCCTCCTTTTTCTGGAAGAAGCGTCTTTGATTTCCGGGCTGAACCAAGATGGTTTATACCTGTACGAGTGGAAGCAATCTCTGGACGACCCGGACTCCTCCCTCTCGTCGTGGAACAACCACGACCCCACCCCATGCAACTGGGCCGGCGTCACCTGCGGCCCAAGCAACACCACCGTGACCGCACTGGACCTCTCCAACTTCAACGTGGCAGGCCCATTCTCCACCTCCCTCCTCTGCCACCTCCCCAACCTCACCTCCATCATCCTCTTCAACAACTCCATCAACCAAACCCTCCCTCTCCAAATCTCCCTCTGCACCCCTCTCCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGCACCCTCCCCCACACCCTCCCCCTCCTCCCCAACCTCCGCTACCTCGACCTCACCGGCAACAACTTCTCCGGCCTCATCCCTTCCTCCTTCGCCACCTTCCCCAACCTCCAAACACTCTCCCTCGTTTACAACCTCCTCGACGACGTCGTTCCACCCTCCCTCTTCAACATCACCACCCTCAAAACGCTCAACCTCTCTTTCAACCCCTTTCTCCCTTCCCCCGTCCCTCACTCCCTCGGCAACCTCACTAACTTGGAAACTCTCTGGCTCAGCGGCTGCAACCTCGTGGGCCCCATCCCGGACTCCCTCGGGAACCTCATAAACCTCCGCGTCTTGGACTTTTCCTTCAACAACCTCTACGGTCCCATCCCGACTTCGCTCACTCGCCTCACCACTCTCAAGCAGATTGAGTTGTACAACAACTCGCTCTCCGGCGAGTTTCCGAAAGGAATGTCCAACCTCACTTCGTTGAGGCTCATTGATGTTTCCATGAACCATTTGACTGGGCCCATTCCTGACGAGTTGTGTCGTTTGCCTCTCGAGAGTCTTAACCTCTACGAGAACCGCTTCACCGGCGAGTTGCCGCAGAGTATCGCCGACTCGCCCAACCTCTATGAACTCAGGCTCTTCGGGAACAACCTCACCGGGAAATTGCCTGACAATCTCGGGAAGAATGCTCCGTTGACGTGGCTTGACGTTTCCACCAACCGGTTCTCCGGTCGGATTCCGGCGAGTCTCTGCGACCACGGCGAGTTGGAGGAGTTGTTGATTCTAGAGAACGAGTTCTCCGGGGAGATTCCGGCGAGCTTGGGCGCGTGTCAGAGCTTGTCGCGCGTGAGGTTGGGTACGAACCGGTTGTCCGGCGAGGTTCCGGCGGGTATGTGGGGTCTTCCACATGTGTACTTGCTTGAACTGGGGGACAACTCGTTTAGTGGCCCAATCGCGAGGACCATTGGTGGGGCGAGGAATTTATCACTGTTGAATTTATCGAAGAACAATTTCTCCGGTGTGATTCCCGACGAGATTGGGTGGTTGGAGACTCTTCAAGAGTTTTCTGGCGGTGACAATATGTTCAATGGGTCGCTTCCTGAGAGTATTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATGAGCTCTCTGGGGAGCTTCCCAAGGGGATTCAATCGTGGAAGAAACTCAATGACTTGAATTTGGCTAATAATCGGATTGGCGGGAAGATTTCTGATGAAATTGGGAGTTTGTCTGTGTTAAATTTTCTTGATCTTTCCAACAATCAATTTTCTGGGAATGTTCCTCTGGGGTTGCAGAATTTGAAGCTCAATCAGCTCAATTTGTCTTATAACAGGCTTTCTGGAAAGCTTCCCCCTCTGCTGGCTAAGGATATGTACAGGGCTAGTTTTATGGGTAATCCTGGTTTGTGTGGGAATTTCAAAGGTTTGTGTGATGGCAAAGGGGATGATAAGAGTAAGGGTTTTGTGTGGGTTCTGCGAGCTATTTTTATAGTTGCCTCTTTGGTGTTTGTGGTAGGTGTGGTCTGGTTCTACTTCAGGTACAGGAATTTCAAGAATGCTGGGAGATCTGTTGATAAATCGAAGTGGACGTTGATGTCGTTTCATAAACTGGGTTTTAGTGAAGATGAGATCTTGAATTGCCTTGATGAAGATAATGTGATAGGAAGTGGATCGTCCGGGAAAGTTTACAAGGTTGTGCTTACCAGTGGGGAAGCTGTTGCTGTGAAGAAGATATGGGGTGGGGTCAAGAAAGAAATAGACAGTGGAGATGTTGAGAAGGGTCAGTTTCATCAAGATAGTTCTTTTGATGCAGAGGTTGAAACTTTGGGCAAAATTAGGCACAAGAACATTGTCAAGCTGTGGTGTTGCTGCACCACTAGGGACAGCAAGCTATTGGTTTATGAGTATATGCCCAATGGTAGTCTGGGGGATTTGTTGCATAGCAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTGTTGATGCTGCAGAAGGCCTCTCTTATTTGCATCATGACTGTGTTCCTTCAATTGTTCACAGAGATGTGAAATCTAACAACATCTTGTTGGATGGAGACTTTGGTGCAAGGGTGGCGGATTTTGGAGTAGCTAAGGTAGTTGATGCCACCGGGAAAGGAACTAAATCCATGTCTGTCATAGCTGGATCTTGTGGGTACATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGTTTTGGTGTTGTCATACTTGAGTTGGTTACTGGAAGGAGGCCCATAGACCCTGAATTTGGGGAAAAAGACTTGGTTATGTGGGCGTGCAACACCTTGGATCAGAAAGGCGTTGACCACGTGATCGACTCCAGGCTTGATTCATGTTTCAAAGAAGAAATTTGCAAGGTCCTCAATATTGGCCTAATGTGCACTAGTCCTCTTCCAATCAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAAGAGGTGGGCACAGAGAACCCAACAAAACCTGCCAAGAAAGATGGGAAGTTGTCCCCTTATTACTATGACGATGGGTCAGATCATGGAAGTGTTGCTTAG 3009 0.4998 MPLQLLPLLLFFSLLFLEEASLISGLNQDGLYLYEWKQSLDDPDSSLSSWNNHDPTPCNWAGVTCGPSNTTVTALDLSNFNVAGPFSTSLLCHLPNLTSIILFNNSINQTLPLQISLCTPLLHLDLSQNLLTGTLPHTLPLLPNLRYLDLTGNNFSGLIPSSFATFPNLQTLSLVYNLLDDVVPPSLFNITTLKTLNLSFNPFLPSPVPHSLGNLTNLETLWLSGCNLVGPIPDSLGNLINLRVLDFSFNNLYGPIPTSLTRLTTLKQIELYNNSLSGEFPKGMSNLTSLRLIDVSMNHLTGPIPDELCRLPLESLNLYENRFTGELPQSIADSPNLYELRLFGNNLTGKLPDNLGKNAPLTWLDVSTNRFSGRIPASLCDHGELEELLILENEFSGEIPASLGACQSLSRVRLGTNRLSGEVPAGMWGLPHVYLLELGDNSFSGPIARTIGGARNLSLLNLSKNNFSGVIPDEIGWLETLQEFSGGDNMFNGSLPESIVNLGQLGTLDLHNNELSGELPKGIQSWKKLNDLNLANNRIGGKISDEIGSLSVLNFLDLSNNQFSGNVPLGLQNLKLNQLNLSYNRLSGKLPPLLAKDMYRASFMGNPGLCGNFKGLCDGKGDDKSKGFVWVLRAIFIVASLVFVVGVVWFYFRYRNFKNAGRSVDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLTSGEAVAVKKIWGGVKKEIDSGDVEKGQFHQDSSFDAEVETLGKIRHKNIVKLWCCCTTRDSKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPSIVHRDVKSNNILLDGDFGARVADFGVAKVVDATGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPIDPEFGEKDLVMWACNTLDQKGVDHVIDSRLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGTENPTKPAKKDGKLSPYYYDDGSDHGSVA 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00787 1002 Gene3D Ribonuclease Inhibitor 25 204 IPR032675 -
Pumo2g00787 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 26 190 - -
Pumo2g00787 1002 ProSiteProfiles Leucine-rich repeat profile. 144 165 IPR001611 GO:0005515
Pumo2g00787 1002 Gene3D Transferase(Phosphotransferase) domain 1 777 991 - -
Pumo2g00787 1002 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Pumo2g00787 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 777 986 - -
Pumo2g00787 1002 SUPERFAMILY RNI-like 75 426 - -
Pumo2g00787 1002 FunFam Receptor-like protein kinase HSL1 672 776 - -
Pumo2g00787 1002 SMART serkin_6 688 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00787 1002 FunFam Receptor-like protein kinase HSL1 312 619 - -
Pumo2g00787 1002 Gene3D Ribonuclease Inhibitor 313 619 IPR032675 -
Pumo2g00787 1002 MobiDBLite consensus disorder prediction 977 991 - -
Pumo2g00787 1002 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 393 970 - -
Pumo2g00787 1002 ProSiteProfiles Protein kinase domain profile. 688 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00787 1002 SUPERFAMILY Protein kinase-like (PK-like) 683 969 IPR011009 -
Pumo2g00787 1002 Pfam Leucine Rich Repeat 217 239 IPR001611 GO:0005515
Pumo2g00787 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Pumo2g00787 1002 SMART LRR_typ_2 94 118 IPR003591 -
Pumo2g00787 1002 SMART LRR_typ_2 502 525 IPR003591 -
Pumo2g00787 1002 SMART LRR_typ_2 215 239 IPR003591 -
Pumo2g00787 1002 SMART LRR_typ_2 142 165 IPR003591 -
Pumo2g00787 1002 SMART LRR_typ_2 287 311 IPR003591 -
Pumo2g00787 1002 SMART LRR_typ_2 166 190 IPR003591 -
Pumo2g00787 1002 MobiDBLite consensus disorder prediction 972 1002 - -
Pumo2g00787 1002 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pumo2g00787 1002 SUPERFAMILY L domain-like 361 611 - -
Pumo2g00787 1002 Pfam Protein kinase domain 690 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00787 1002 Gene3D Ribonuclease Inhibitor 205 312 IPR032675 -
Pumo2g00787 1002 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515
Pumo2g00787 1002 Gene3D Phosphorylase Kinase; domain 1 672 776 - -
Pumo2g00787 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 214 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00787 Pumo-Chr2 12082430 12087117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00787 26 1002 Receptor kinase-like Gene Family AT1G28440 68.566 0.0 1360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo2g00787 Pkinase 3.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00787 - - gmx:100776936 1828.14