Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00776 ATGGATGCTGAAGAGTTGTTTCAGGCTCAGGCACTTTTATATAACTATACTTATAGTTTCATTGGTTCCATGTGCCTCAAAAGTGCAGTTCATTTGGGAATACCAGACATAATCTCCAACAACGGCCAACCCATTACTATCACAGAGTTGGTCTTGGCACTTCAGATTCACCCTACTAAATCTGATTGTGTATACAGGCTCATTCTCTTGCTGGTGCATGCTGGCTTCTTTGCTACAACCAAGGTTGTTAAAGATGATAAGGAAGAAGTGGGGTATGATCTCACACCTTCCTCTAGGCTACTCCTTAAAGACAATGTTCCTACGTTGTCTCCTTATGTTCGGGCAATGTTTCATCCTGCTCTTGCTCGCTCATCAGAATTCTTGGCTGAGTGGTTTCACAGAAATGAGCCCACACCCTTTCAAACTGCATTCGGCACCGGTTTCTGGGACTATGCCAGCCAAAACAAAGAGTTTAATGACCTCTTAAATGAAGCAATGATTGGTGATTCTGGCACGATGAATTTGGTGATCAAAAACTGCAAACATGTTTTTGAGGGACTGAACTCATTGGTTGATGTTGGGGGTGGTAAAGGAAGTGTAGGTAGGATAGTTACTGAGTCACTGCCTAATTTGCATTGGACTGTGCTTGATCTTCCTCATGTGGTTGAAAATTTGCCTGACAGCACCAATTTGAAATTTGTTGGAGGTGACATGTTTCAGTCTATTCCTTCAGCAGATGCAATTCTTCTAAAGTTAGTATTGCATGTTTTGAATGATGAAGAGTGCATTAAGGTTAATGGAAGAGAGAGAGAGAAGAGAAAGAATGGGAGAAACTCTTCTTGGAAGCTGGATTCAGTCATTACAAGATAA 870 0.4149 MDAEELFQAQALLYNYTYSFIGSMCLKSAVHLGIPDIISNNGQPITITELVLALQIHPTKSDCVYRLILLLVHAGFFATTKVVKDDKEEVGYDLTPSSRLLLKDNVPTLSPYVRAMFHPALARSSEFLAEWFHRNEPTPFQTAFGTGFWDYASQNKEFNDLLNEAMIGDSGTMNLVIKNCKHVFEGLNSLVDVGGGKGSVGRIVTESLPNLHWTVLDLPHVVENLPDSTNLKFVGGDMFQSIPSADAILLKLVLHVLNDEECIKVNGREREKRKNGRNSSWKLDSVITR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00776 289 MobiDBLite consensus disorder prediction 268 289 - -
Pumo2g00776 289 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 289 IPR016461 GO:0008168
Pumo2g00776 289 Gene3D Vaccinia Virus protein VP39 102 280 IPR029063 -
Pumo2g00776 289 Gene3D - 1 101 IPR036388 -
Pumo2g00776 289 Pfam O-methyltransferase domain 128 268 IPR001077 GO:0008171
Pumo2g00776 289 PANTHER O-METHYLTRANSFERASE 5 265 IPR016461 GO:0008168
Pumo2g00776 289 FunFam Coniferyl alcohol 9-O-methyltransferase 1 101 - -
Pumo2g00776 289 Pfam Dimerisation domain 24 72 IPR012967 GO:0046983
Pumo2g00776 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 265 IPR029063 -
Pumo2g00776 289 SUPERFAMILY "Winged helix" DNA-binding domain 4 105 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00776 Pumo-Chr2 11959624 11960748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00776 24 264 Monolignol Biosynthesis Gene Families AT5G54160 32.669 3.80e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00776 K22588 - qsu:112018723 340.502