Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00771 ATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACAGCAAAATCTCCATGGAATGCACCTGAGCTCTTTGATATTTGTGTTCTTGAGGGCGAGACTATTAGGGAGTGGCTTTTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCACTGCCGGATTATAGTGGACGTGGATGGCATGAATCTAGAAAGCAAGTGATGAACGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTCTGAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGTGATGCATGTGCCTTATACAGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCCAAGGCAAAGATAGTAACAGGTGATTCAGTTGCTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCACTCTGATAATAACAAACGGTTTGCCAAAGGAACAACAAGACAAGGTGATTTTTTATCCTTGTCAAGACATTGTGAATAG 606 0.4373 MTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDACALYRLELKLVDGKKSSKAKIVTGDSVADLQKHMGSLSAEFHSDNNKRFAKGTTRQGDFLSLSRHCE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00771 201 PANTHER TRANSCRIPTION FACTOR VOZ1 1 189 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00771 Pumo-Chr2 11946493 11947724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00771 1 175 VOZ-9 Transcription Factor Family AT1G28520 86.857 2.89e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Pumo2g00771 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00771 - - gmx:100784593 357.836