Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00765 ATGGACCAACAACATAAAGTGATTCTTCTGCTGCTTCTGCTTTTCCAAGTTCTGCTTGTAGCATCACAAAACACAGACAGTCGAGATTATACTGGCCTAAATTCTCTTACGCAATCCTGGAGTAACAAGCCACAAAATTGGGTGGGTACAGATCCTTGTGGTGGTGGATGGGATGGAATTCGTTGCAGCAATACAAGAATTACCCAATTGAGACTACCAGGCTTGAATTTGGGGGGCCAGCTGTCTTCGGCAATTCAGTCTTTATCTGAACTAGATACTCTGGATCTTTCTTACAACACGGTCTTGACAGGAACAATTCCACAAGAAATTGGGAATTTGAAAAAGCTAAAATCACTATCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCAGATTCAATAGGATCTTTAAGGCAGCTGACCTTTCTAGCACTGAATTCTAATAGGTTCAGTGGAACTATACCACGCTCTCTTGGCAATCTATCAAATATTGATTGGCTTGATCTTGCTGAAAACGAGCTTGAAGGGACTATTCCTGTCTCTGATGACCAAGGACGACCAGGCCTTGACCTGCTCCTTAAGGCAAAACACTTTCATATGGGGACCAATAAGCTCACTGGTACAATACCAGAAAAACTTTTTAACTCCAGTATGATTCTAGAACATGTGCTTTTCGACCACAATCAACTAGAGGGTGGTATTCCTAGATCCCTTAGTACTGTGAGCACATTGGAAGTTGCGCGCTTTGATAGGAATTCGTTAACTGGGGGAGTGCCTTCAAGCTTAAACAGACTCGGAAACCTTAGTGAGATCTATTTATCTCACAATAAGCTGAATGGCTCTCTGCCGGATTTTACTGGAATGAATAGTCTCACCTATGTTGACCTGAGCGACAATGATTTCAATGCTTCTGATATTCCTTCATGGGTTACAACCCTGCCAGAACTGACAACAGTGATACTTGGGCAGAACCTGCTTGGTGGCACATTAAATCTTAGTGGCTACAGCAATAGTCTGCAACTCGTTAGTTTGGAGGATAATGAAATAACAGAACTTGACCCGGAAAACAACTTACCAAATTTTGAGCTAAGACTAGCTAACAACCCAATTTGTCGTGAAAGTGGAGCTTCTGATAAGAGTTACTGCAAACAACCAGTACCCAATCCCACGTTTTATTCAACACCGCCAAATAATTGTGCACCTCAATCTTGCGGTTCCGATCAGGTTTCCAGCCCAAATTGCAGATGTGCATTTCCCTATAGTGGACTTCTTATATCAAGAGCTCTTAGTTTCTCAAACTTCAGTAATGCAAGTTACTATAGGGAGCTTGAGCAGTCTCTGATGGATACTTTTCGAAACCAAAGCAGTCCAGTGGATTCAGTTTCTCTTAGTAACCCCTTCAGGAATTCTACTTCTGATAATTTTGAATTGACTCTGGAAGTCTTCCCTTCGCAAACCGATCGTTTCAATACAACTGGAGTTTTGACAATTGCTTTTCTGCTAAGCAACCAAATTTACAAACCCCCAGAATTCTTCTCCCCTTACATCTTCAAGGGTGCTAATTATGATTACTACGGAGGAGAACCAAACACATCAAAGTCATCATCACATACAGGGGTTATAGTTGGTGCAGTAGTCGCTGTTGTGGTCTTTGTTGTACTAGCAGTCCTTGCAGGAATGTATGCCATTCGCCAGAAAAGAAGAGCAAGAAGATCTGCAGAGTTGAACCCTTTTGCAAATTGGGAACAGAATCCGCAGAGTGGCACTGCTCCTCAGTTGAAAGGAGCACGTTGGTTTTCTTTTGATGACCTAAGGAAATACACCAACAACTTCCCAGAAGCCAATACTATTGGATCTGGAGGCTATGGAAAGGTTTACCAAGGAACTCTTCCCTCTGGGGAGTTGGTTGCCATCAAACGGGCTGCAAAAGAGTCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTTCATCATAAGAATCTCGTTGGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGCACATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGGAAGTCTGGGATCTGGATGGATTGGATACGGAGGCTTAAAGTAGCATTAGGTGCAGCCAGGGGTTTGGCCTATCTTCATGAACTTGCTAACCCACCTATCATACACAGGGACATCAAATCAAGCAACATTCTACTTGATCATCACCTCAATGCAAAAGTTGCAGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAGTTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGTTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGACACATCAAAGGATCTATACAACCTTCATTCCATTCTAGACCCAACCATAATGAAAACAAGACCAAAAGGTTTAGAAAAGTTTGTGACGTTGGCAATGAGGTGCGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTAAAAGAGATTGAGAGCATAATCGAGCTTGTTGGACTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTATGAGGAAGCAAGTGGAGGGAATGCCCAACATCCTTACCGGGAAGAAGATTTTAGCTATAGTGGAATCTTTCCATCAACAAGGGTAGAACCCCAATAA 2799 0.4241 MDQQHKVILLLLLLFQVLLVASQNTDSRDYTGLNSLTQSWSNKPQNWVGTDPCGGGWDGIRCSNTRITQLRLPGLNLGGQLSSAIQSLSELDTLDLSYNTVLTGTIPQEIGNLKKLKSLSLVGCGFSGPIPDSIGSLRQLTFLALNSNRFSGTIPRSLGNLSNIDWLDLAENELEGTIPVSDDQGRPGLDLLLKAKHFHMGTNKLTGTIPEKLFNSSMILEHVLFDHNQLEGGIPRSLSTVSTLEVARFDRNSLTGGVPSSLNRLGNLSEIYLSHNKLNGSLPDFTGMNSLTYVDLSDNDFNASDIPSWVTTLPELTTVILGQNLLGGTLNLSGYSNSLQLVSLEDNEITELDPENNLPNFELRLANNPICRESGASDKSYCKQPVPNPTFYSTPPNNCAPQSCGSDQVSSPNCRCAFPYSGLLISRALSFSNFSNASYYRELEQSLMDTFRNQSSPVDSVSLSNPFRNSTSDNFELTLEVFPSQTDRFNTTGVLTIAFLLSNQIYKPPEFFSPYIFKGANYDYYGGEPNTSKSSSHTGVIVGAVVAVVVFVVLAVLAGMYAIRQKRRARRSAELNPFANWEQNPQSGTAPQLKGARWFSFDDLRKYTNNFPEANTIGSGGYGKVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEHIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKTRPKGLEKFVTLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEASGGNAQHPYREEDFSYSGIFPSTRVEPQ 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00765 932 SMART serkin_6 611 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00765 932 Gene3D Ribonuclease Inhibitor 196 284 IPR032675 -
Pumo2g00765 932 Gene3D Transferase(Phosphotransferase) domain 1 687 900 - -
Pumo2g00765 932 SUPERFAMILY L domain-like 45 372 - -
Pumo2g00765 932 CDD STKc_IRAK 617 882 - -
Pumo2g00765 932 PANTHER RECEPTOR-LIKE PROTEIN 55 37 882 - -
Pumo2g00765 932 ProSitePatterns Protein kinases ATP-binding region signature. 617 643 IPR017441 GO:0005524
Pumo2g00765 932 FunFam Leucine-rich repeat protein kinase family protein 578 686 - -
Pumo2g00765 932 MobiDBLite consensus disorder prediction 891 905 - -
Pumo2g00765 932 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 687 895 - -
Pumo2g00765 932 FunFam Leucine-rich repeat protein kinase family protein 185 284 - -
Pumo2g00765 932 ProSiteProfiles Leucine-rich repeat profile. 338 359 IPR001611 GO:0005515
Pumo2g00765 932 Gene3D Ribonuclease Inhibitor 18 186 IPR032675 -
Pumo2g00765 932 MobiDBLite consensus disorder prediction 891 932 - -
Pumo2g00765 932 ProSiteProfiles Protein kinase domain profile. 611 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00765 932 FunFam Leucine-rich repeat family protein 28 183 - -
Pumo2g00765 932 Gene3D Ribonuclease Inhibitor 285 385 IPR032675 -
Pumo2g00765 932 Pfam Protein kinase domain 614 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00765 932 SUPERFAMILY Protein kinase-like (PK-like) 597 893 IPR011009 -
Pumo2g00765 932 Gene3D Phosphorylase Kinase; domain 1 582 686 - -
Pumo2g00765 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00765 Pumo-Chr2 11899801 11908387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00765 8 932 Receptor kinase-like Gene Family AT5G49760 52.781 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pumo2g00765 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00765 - - gmx:100786172 1670.98