Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g00765 | ATGGACCAACAACATAAAGTGATTCTTCTGCTGCTTCTGCTTTTCCAAGTTCTGCTTGTAGCATCACAAAACACAGACAGTCGAGATTATACTGGCCTAAATTCTCTTACGCAATCCTGGAGTAACAAGCCACAAAATTGGGTGGGTACAGATCCTTGTGGTGGTGGATGGGATGGAATTCGTTGCAGCAATACAAGAATTACCCAATTGAGACTACCAGGCTTGAATTTGGGGGGCCAGCTGTCTTCGGCAATTCAGTCTTTATCTGAACTAGATACTCTGGATCTTTCTTACAACACGGTCTTGACAGGAACAATTCCACAAGAAATTGGGAATTTGAAAAAGCTAAAATCACTATCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCAGATTCAATAGGATCTTTAAGGCAGCTGACCTTTCTAGCACTGAATTCTAATAGGTTCAGTGGAACTATACCACGCTCTCTTGGCAATCTATCAAATATTGATTGGCTTGATCTTGCTGAAAACGAGCTTGAAGGGACTATTCCTGTCTCTGATGACCAAGGACGACCAGGCCTTGACCTGCTCCTTAAGGCAAAACACTTTCATATGGGGACCAATAAGCTCACTGGTACAATACCAGAAAAACTTTTTAACTCCAGTATGATTCTAGAACATGTGCTTTTCGACCACAATCAACTAGAGGGTGGTATTCCTAGATCCCTTAGTACTGTGAGCACATTGGAAGTTGCGCGCTTTGATAGGAATTCGTTAACTGGGGGAGTGCCTTCAAGCTTAAACAGACTCGGAAACCTTAGTGAGATCTATTTATCTCACAATAAGCTGAATGGCTCTCTGCCGGATTTTACTGGAATGAATAGTCTCACCTATGTTGACCTGAGCGACAATGATTTCAATGCTTCTGATATTCCTTCATGGGTTACAACCCTGCCAGAACTGACAACAGTGATACTTGGGCAGAACCTGCTTGGTGGCACATTAAATCTTAGTGGCTACAGCAATAGTCTGCAACTCGTTAGTTTGGAGGATAATGAAATAACAGAACTTGACCCGGAAAACAACTTACCAAATTTTGAGCTAAGACTAGCTAACAACCCAATTTGTCGTGAAAGTGGAGCTTCTGATAAGAGTTACTGCAAACAACCAGTACCCAATCCCACGTTTTATTCAACACCGCCAAATAATTGTGCACCTCAATCTTGCGGTTCCGATCAGGTTTCCAGCCCAAATTGCAGATGTGCATTTCCCTATAGTGGACTTCTTATATCAAGAGCTCTTAGTTTCTCAAACTTCAGTAATGCAAGTTACTATAGGGAGCTTGAGCAGTCTCTGATGGATACTTTTCGAAACCAAAGCAGTCCAGTGGATTCAGTTTCTCTTAGTAACCCCTTCAGGAATTCTACTTCTGATAATTTTGAATTGACTCTGGAAGTCTTCCCTTCGCAAACCGATCGTTTCAATACAACTGGAGTTTTGACAATTGCTTTTCTGCTAAGCAACCAAATTTACAAACCCCCAGAATTCTTCTCCCCTTACATCTTCAAGGGTGCTAATTATGATTACTACGGAGGAGAACCAAACACATCAAAGTCATCATCACATACAGGGGTTATAGTTGGTGCAGTAGTCGCTGTTGTGGTCTTTGTTGTACTAGCAGTCCTTGCAGGAATGTATGCCATTCGCCAGAAAAGAAGAGCAAGAAGATCTGCAGAGTTGAACCCTTTTGCAAATTGGGAACAGAATCCGCAGAGTGGCACTGCTCCTCAGTTGAAAGGAGCACGTTGGTTTTCTTTTGATGACCTAAGGAAATACACCAACAACTTCCCAGAAGCCAATACTATTGGATCTGGAGGCTATGGAAAGGTTTACCAAGGAACTCTTCCCTCTGGGGAGTTGGTTGCCATCAAACGGGCTGCAAAAGAGTCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTTCATCATAAGAATCTCGTTGGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGCACATTCCAAATGGCACTTTAATGGATAGTCTCTCAGGGAAGTCTGGGATCTGGATGGATTGGATACGGAGGCTTAAAGTAGCATTAGGTGCAGCCAGGGGTTTGGCCTATCTTCATGAACTTGCTAACCCACCTATCATACACAGGGACATCAAATCAAGCAACATTCTACTTGATCATCACCTCAATGCAAAAGTTGCAGATTTTGGTCTCTCCAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGACCCAGCAGTTGACTGAAAAGAGTGATGTATATAGCTTTGGAGTGTTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAGGTAATGAGGGTAATGGACACATCAAAGGATCTATACAACCTTCATTCCATTCTAGACCCAACCATAATGAAAACAAGACCAAAAGGTTTAGAAAAGTTTGTGACGTTGGCAATGAGGTGCGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTAAAAGAGATTGAGAGCATAATCGAGCTTGTTGGACTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTATGAGGAAGCAAGTGGAGGGAATGCCCAACATCCTTACCGGGAAGAAGATTTTAGCTATAGTGGAATCTTTCCATCAACAAGGGTAGAACCCCAATAA | 2799 | 0.4241 | MDQQHKVILLLLLLFQVLLVASQNTDSRDYTGLNSLTQSWSNKPQNWVGTDPCGGGWDGIRCSNTRITQLRLPGLNLGGQLSSAIQSLSELDTLDLSYNTVLTGTIPQEIGNLKKLKSLSLVGCGFSGPIPDSIGSLRQLTFLALNSNRFSGTIPRSLGNLSNIDWLDLAENELEGTIPVSDDQGRPGLDLLLKAKHFHMGTNKLTGTIPEKLFNSSMILEHVLFDHNQLEGGIPRSLSTVSTLEVARFDRNSLTGGVPSSLNRLGNLSEIYLSHNKLNGSLPDFTGMNSLTYVDLSDNDFNASDIPSWVTTLPELTTVILGQNLLGGTLNLSGYSNSLQLVSLEDNEITELDPENNLPNFELRLANNPICRESGASDKSYCKQPVPNPTFYSTPPNNCAPQSCGSDQVSSPNCRCAFPYSGLLISRALSFSNFSNASYYRELEQSLMDTFRNQSSPVDSVSLSNPFRNSTSDNFELTLEVFPSQTDRFNTTGVLTIAFLLSNQIYKPPEFFSPYIFKGANYDYYGGEPNTSKSSSHTGVIVGAVVAVVVFVVLAVLAGMYAIRQKRRARRSAELNPFANWEQNPQSGTAPQLKGARWFSFDDLRKYTNNFPEANTIGSGGYGKVYQGTLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEHIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKTRPKGLEKFVTLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEASGGNAQHPYREEDFSYSGIFPSTRVEPQ | 932 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g00765 | 932 | SMART | serkin_6 | 611 | 883 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00765 | 932 | Gene3D | Ribonuclease Inhibitor | 196 | 284 | IPR032675 | - | |
Pumo2g00765 | 932 | Gene3D | Transferase(Phosphotransferase) domain 1 | 687 | 900 | - | - | |
Pumo2g00765 | 932 | SUPERFAMILY | L domain-like | 45 | 372 | - | - | |
Pumo2g00765 | 932 | CDD | STKc_IRAK | 617 | 882 | - | - | |
Pumo2g00765 | 932 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 37 | 882 | - | - | |
Pumo2g00765 | 932 | ProSitePatterns | Protein kinases ATP-binding region signature. | 617 | 643 | IPR017441 | GO:0005524 | |
Pumo2g00765 | 932 | FunFam | Leucine-rich repeat protein kinase family protein | 578 | 686 | - | - | |
Pumo2g00765 | 932 | MobiDBLite | consensus disorder prediction | 891 | 905 | - | - | |
Pumo2g00765 | 932 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 687 | 895 | - | - | |
Pumo2g00765 | 932 | FunFam | Leucine-rich repeat protein kinase family protein | 185 | 284 | - | - | |
Pumo2g00765 | 932 | ProSiteProfiles | Leucine-rich repeat profile. | 338 | 359 | IPR001611 | GO:0005515 | |
Pumo2g00765 | 932 | Gene3D | Ribonuclease Inhibitor | 18 | 186 | IPR032675 | - | |
Pumo2g00765 | 932 | MobiDBLite | consensus disorder prediction | 891 | 932 | - | - | |
Pumo2g00765 | 932 | ProSiteProfiles | Protein kinase domain profile. | 611 | 883 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00765 | 932 | FunFam | Leucine-rich repeat family protein | 28 | 183 | - | - | |
Pumo2g00765 | 932 | Gene3D | Ribonuclease Inhibitor | 285 | 385 | IPR032675 | - | |
Pumo2g00765 | 932 | Pfam | Protein kinase domain | 614 | 877 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00765 | 932 | SUPERFAMILY | Protein kinase-like (PK-like) | 597 | 893 | IPR011009 | - | |
Pumo2g00765 | 932 | Gene3D | Phosphorylase Kinase; domain 1 | 582 | 686 | - | - | |
Pumo2g00765 | 932 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 731 | 743 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g00765 | Pumo-Chr2 | 11899801 | 11908387 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g00765 | 8 | 932 | Receptor kinase-like Gene Family | AT5G49760 | 52.781 | 0.0 | 927 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Pumo2g00765 | Pkinase | 8.9e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g00765 | - | - | gmx:100786172 | 1670.98 |