Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00763 ATGGCTTCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCTAAGCCTTGCAACCCTCACCACCAATGGCAGCATGATATCAACTCCTCCCTCATCTCAACTGGTTGCCACAGAAGCCCTTACACTTCAGGAGCGGGTGAGGAGAGAAGTCCAGAGCCAAAGCCAAGGTGGAACCCAAAACCTGAGCAAATTCGCATTCTGGAGGCTATATTCAACTCTGGAATGGTGAATCCTCCGAGAGATGAGATAAGGAAGATAAGGGCACAGTTGCAAGAGTATGGCCAAGTGGGTGATGCCAATGTGTTCTATTGGTTCCAGAACCGCAAATCAAGGAGCAAACACAAGCTTCGCCATCTCCAAAACTCAAAGAACCAGAACCTTGAAACCCAACAAAACCCCACTTCTCTCCCTAAAATCACTGCACCCTCATCCTCATCCTCCTCCTCTGAGAAATCTTCACCAAAAGGAATAATACCCACCAAGGTATTCTCCATTGGATTCTCTAACGTCACCGATGTGGTGCCTAATTCTCCAACTGCTTCTGTGAACCAGACCTATTTTCAAACCCACAATGAGTCTTCTCTGCTTCGACCACCACCACCTGCTACTGCACCAGTTGAGGCTTTCTTCTTCCCAGTGCAACATCATGGGCAGGGTGTACCACCTAGTACGGTGACATCACAAGGGTTTTGCTTCTCTGAGCTGTCCAATGTTGTTCATGTTCAATCACATGCTCAACACAACGTTGGTCCTTGCACTAGCCTTTTGCTCAGTGAGATAGTAAACCATGGTGGTGCTGCTGCCTCCAAGAAAGATCTAGAACAAGACAAGTCTCTGAAAATAATGCACCAGCCCTCACTGCTTAATTTCTGTGTCACTCCCACAACAACAGCTCCTCCTACTACCACTGTTGTACTTCCCATCACTACCTCCTCCACTACTGTTCCATCCACTGTCATTGCTCAAGTTCAAGGTGTAGGAGATCCAGCTGCTGCGGCGAGATCAACGGTGTTCATTAACGATGTGGCATTTGATGTAGCGGTGGGACCTTTCAATGTGCGTGAAGCATTTGGAGATGATGCTGTGCTCATCCATGCCACTGGTCAACCTGTTCTAACAAACCAATGGGGTGTCACTCTTCATTCACTCCAGCATGGCGCATCACTATTACTTCATGACGCTGCTTTATTGAAGTCACTTATGGGCTATGGCTATGGCACTGCTAATGCTACATCTCAGTGA 1242 0.475 MASSNRHWPSMFKSKPCNPHHQWQHDINSSLISTGCHRSPYTSGAGEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNQNLETQQNPTSLPKITAPSSSSSSSEKSSPKGIIPTKVFSIGFSNVTDVVPNSPTASVNQTYFQTHNESSLLRPPPPATAPVEAFFFPVQHHGQGVPPSTVTSQGFCFSELSNVVHVQSHAQHNVGPCTSLLLSEIVNHGGAAASKKDLEQDKSLKIMHQPSLLNFCVTPTTTAPPTTTVVLPITTSSTTVPSTVIAQVQGVGDPAAAARSTVFINDVAFDVAVGPFNVREAFGDDAVLIHATGQPVLTNQWGVTLHSLQHGASLLLHDAALLKSLMGYGYGTANATSQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00763 413 MobiDBLite consensus disorder prediction 114 155 - -
Pumo2g00763 413 SMART HOX_1 52 119 IPR001356 GO:0003677
Pumo2g00763 413 MobiDBLite consensus disorder prediction 1 20 - -
Pumo2g00763 413 MobiDBLite consensus disorder prediction 34 61 - -
Pumo2g00763 413 FunFam WUSCHEL-related homeobox 11 54 121 - -
Pumo2g00763 413 Gene3D - 54 120 - -
Pumo2g00763 413 ProSiteProfiles 'Homeobox' domain profile. 50 115 IPR001356 GO:0003677
Pumo2g00763 413 MobiDBLite consensus disorder prediction 122 155 - -
Pumo2g00763 413 CDD homeodomain 53 115 IPR001356 GO:0003677
Pumo2g00763 413 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 390 IPR044557 GO:0003700|GO:0050793
Pumo2g00763 413 Pfam Homeodomain 54 114 IPR001356 GO:0003677
Pumo2g00763 413 SUPERFAMILY Homeodomain-like 50 118 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00763 Pumo-Chr2 11866262 11868996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00763 1 391 Wox Gene Family AT5G45980 37.817 5.91e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo2g00763 Homeodomain 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00763 - - pvu:PHAVU_006G179900g 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00763 2 11866262 11868996 Pumo2g00763 2 11866262 11868996 ECH