Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00759 ATGCCCCCACCTCTTCCCATTTATTCCATAGATAGATATATGCCAACTTGCCCTTCCTTCAAAAACAAAAACCATAGAGAGATTGAGAAGAGAAACAAAACAAACATGGGAAGCAAGAAAACCTACGAGGAAGAAGCCACGGTCTTATTTTCCCAACCCCAAACAGAGTTGTTACCCTTCAACGAGAACGACCCACAGGACATGGTCATATACCAAGTCCTCAACGAGGCCAATGCTCTCACCAACACATTTCTCCCTCAGAGACTCCACCAACCTCAACTGGGCCTAGAGCCCACCAGAAACATAGCCAAGAAACACTACAGAGGAGTTCGGCGCCGCCCCTGGGGGAAGTACGCCGCTGAGATTCGAGACTCGGCGCGCCACGGCGCCAGAATATGGCTCGGCACCTTCCAAACCGCTGAAGAGGCTGCCATGGCTTATGATCGAGCCGCCTTCAAGATGAGGGGAGCTAAGGCTTTGCTCAATTTCCCAGCTGAAATTGTTGCTGCAGCAACAGAGTTATCTTTCAATAATAATAACAATCACGATGCTGTTTCTGATTCCAGTGCTGGTAGCTCTAATTGCACGAACATTTCCACTCAGGTAAATAGGAATCAGTCAGAAAGCACAAGTAGCACAGGTTAG 645 0.4837 MPPPLPIYSIDRYMPTCPSFKNKNHREIEKRNKTNMGSKKTYEEEATVLFSQPQTELLPFNENDPQDMVIYQVLNEANALTNTFLPQRLHQPQLGLEPTRNIAKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAFKMRGAKALLNFPAEIVAAATELSFNNNNNHDAVSDSSAGSSNCTNISTQVNRNQSESTSSTG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00759 214 ProSiteProfiles AP2/ERF domain profile. 106 164 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 MobiDBLite consensus disorder prediction 184 214 - -
Pumo2g00759 214 CDD AP2 105 165 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 PANTHER DNA-BINDING DOMAIN 54 201 IPR044808 GO:0003700|GO:0009873
Pumo2g00759 214 SUPERFAMILY DNA-binding domain 106 166 IPR016177 GO:0003677
Pumo2g00759 214 Gene3D AP2/ERF domain 105 166 IPR036955 GO:0003700|GO:0006355
Pumo2g00759 214 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 Pfam AP2 domain 106 156 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 SMART rav1_2 106 170 IPR001471 GO:0003700|GO:0006355
Pumo2g00759 214 FunFam Ethylene-responsive transcription factor 2 105 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00759 Pumo-Chr2 11836832 11837752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00759 58 167 AP2-EREBP Transcription Factor Family AT5G47220 48.462 2.74e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pumo2g00759 AP2 8.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00759 K13433 - gmx:100811533 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00759 2 11836832 11837752 Pumo2g00759 2 11836832 11837752 ECH