Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00758 ATGGATATTCATAGTAATCACAGTGCAACTTCTGAAGGGATTCTTGAGAATGTGTGGGCCAAAATTATGAGCAGTGATAGAGCAGATGGAAGAAAAGGTGATGCAGCAGAATCTTGTAACTCTTGGGAAGAACTTCCTAACCTTGATGGAAGAGAAGGGTCCATGGAAATTCTACAAAGGCTTCCAAGTTTAGGGAGGTGGATATCAATGGGAGCTGATTTCTGGGAAGAAGTTTTAGAAGGTGTTGTTCTACCTAATACAAGCAATACTGAAGATTCTAGCAACAACAATTTGGAAATTGGAAGTGCTAATGAATCCAATAACAAGGTGGAAGATGCTGTGAGAATAGAGAAGGCAGTTACAAAACACTACAGAGGAGTTAGGAGAAGGCCATGGGGTAAATATGCTGCAGAGATTAGAGACTCATCCAAGAAAGGTGCTAGAGTTTGGCTTGGAACATTTGACACAGCTGAAGAAGCAGCTTTGGCCTATGACAAGGCTGCTTTGAGGATTAGAGGTCCAAAGGCATACCTTAATTTCCCACTTGAGAGGGTTGCAAATGCTTTAGGATGTGACCACAAAGGAACTCATCTTGCTTGCACATGCATATGGAACAAAGAAAAATTGATCAATTCCAGGAAGAGAGCAGCACCAAGGGAAATGGAAGTATTTGATGATATGATGGATGAACAACCTGCAACAAAAAAGGTGGCAGGCTTGGAATGCATGGTAGAAAATGAACTAGGTCTTTTTGTATTTCAGGACCTAGGAAGTGATTACTTGGACAGTTTGTTGTCTTCTTTTTGA 807 0.4102 MDIHSNHSATSEGILENVWAKIMSSDRADGRKGDAAESCNSWEELPNLDGREGSMEILQRLPSLGRWISMGADFWEEVLEGVVLPNTSNTEDSSNNNLEIGSANESNNKVEDAVRIEKAVTKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLERVANALGCDHKGTHLACTCIWNKEKLINSRKRAAPREMEVFDDMMDEQPATKKVAGLECMVENELGLFVFQDLGSDYLDSLLSSF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00758 268 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 ProSiteProfiles AP2/ERF domain profile. 123 181 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 Gene3D AP2/ERF domain 122 183 IPR036955 GO:0003700|GO:0006355
Pumo2g00758 268 CDD AP2 122 181 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 SMART rav1_2 123 187 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 Pfam AP2 domain 123 173 IPR001471 GO:0003700|GO:0006355
Pumo2g00758 268 PANTHER DNA-BINDING DOMAIN 96 208 IPR044808 GO:0003700|GO:0009873
Pumo2g00758 268 FunFam Ethylene-responsive transcription factor 2 122 183 - -
Pumo2g00758 268 SUPERFAMILY DNA-binding domain 123 182 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00758 Pumo-Chr2 11827306 11828166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00758 14 268 AP2-EREBP Transcription Factor Family AT4G18450 36.601 2.45e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo2g00758 AP2 3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00758 - - gmx:100820226 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00758 2 11827306 11828166 Pumo2g00758 2 11827306 11828166 ECH