LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g00754	ATGACCATACTAGAGGAAAGAATGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCATCGAAGTCTAAAGAGTCGGCATGGATGTTCACAAAGCCCTTTACCTGGGAACTGTGGATGGTTACAGGTGCCATTTTGATTTACACAATGTTAGCAGTTTGGTATCTTGAAAGAGAATTCAATCCTGAGTTTCATGGCAATTGGAAGAACCAGATCAGCACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTCGCTCATAGGGAGAAAATGCATAGCAACTTAACTCGCATGGTGATGGTCTCATGGCTCTTGCTAGTTCTGATTCTTACCTCATGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTTAAACAACTGCAACCAAATGTCAGAGACATTCAGTGGTTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCCTTTGTTAGGTCATTCCTGGAGAAAGTAGAAAAGTTCAAGCCTGAGAACATAAAAAATGTTACTGATGAATACAAGTATGATGATGCATTTAAAAATAACACCATAGCAGCTGCCTTTCTTGAACTCCCATATGAAAAAGTATTCATTAGTGAGCACTGCAACAGATACACTGGTTCCACTCCCAGAACCAGATTTGGAGGATTGGGCTTTAAAGGCTCACCAGTGGCTAGAGACGTGTCAAAAGCTATATTACATCTCTCAGAAAAAGCAGAGCTGAAGAGATTGGAAGAGAAGTGGTTGATTACCTCACAGAAGTGCTCCAACACGACCTCCGACAATACGGAAAGTTTGAAGCTGAGAAGTTTATGGATTCTATATGTCATCTCTGGTGCCACTTCCACCATTTGTCTGGTACTATCAACCATCCAGTCTCTAGTAAAATCCTGTCACCAATGTCAAGCTGTGGCACCAGAAGAAGGCAATGACACACCAAGTGATCATAATGTGTGGGAAAAGGTGATTACACATGCAAAGCAGATTTTTAACAAAAAGATCAATAATTCAAGTGAGGCACAGGAACAGGTTGTAACTGATTGTTCTTCTAGATGGGATCATGTGAGCATGAACGATTCCCCTGAGCATCAGCATGAAATGGCTTCTCCAGTACCCGGAATTTTAATGCTCCCTTCTCCACCACCAGAGGTTCAGATGACAACTCATGATTTAGGAATCACCAACACTTCAAAGTAG	1221	0.4144	MTILEERMQYVDFTVPYAESGLSMIVPSKSKESAWMFTKPFTWELWMVTGAILIYTMLAVWYLEREFNPEFHGNWKNQISTALWFTFSSLFFAHREKMHSNLTRMVMVSWLLLVLILTSCYTASLSSMLTVKQLQPNVRDIQWLKRNNMKIGCDGDSFVRSFLEKVEKFKPENIKNVTDEYKYDDAFKNNTIAAAFLELPYEKVFISEHCNRYTGSTPRTRFGGLGFKGSPVARDVSKAILHLSEKAELKRLEEKWLITSQKCSNTTSDNTESLKLRSLWILYVISGATSTICLVLSTIQSLVKSCHQCQAVAPEEGNDTPSDHNVWEKVITHAKQIFNKKINNSSEAQEQVVTDCSSRWDHVSMNDSPEHQHEMASPVPGILMLPSPPPEVQMTTHDLGITNTSK	406

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pumo2g00754	406	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	1	338	IPR015683	-
Pumo2g00754	406	Pfam	Bacterial extracellular solute-binding proteins, family 3	1	257	IPR001638	-
Pumo2g00754	406	SUPERFAMILY	Periplasmic binding protein-like II	1	257	-	-
Pumo2g00754	406	Gene3D	-	29	178	-	-
Pumo2g00754	406	FunFam	Glutamate receptor	34	172	-	-
Pumo2g00754	406	Pfam	Ligand-gated ion channel	258	287	IPR001320	GO:0015276\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g00754	Pumo-Chr2	11797798	11799988	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo2g00754	1	307	Ion Channels	AT2G29120	38.907	8.31e-65	221

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g00754	-		-	gmx:100818619	742.651

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo2g00754	2	11797798	11799988	Pumo2g00754	2	11797798	11799988	ECH

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