Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00754 ATGACCATACTAGAGGAAAGAATGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCATCGAAGTCTAAAGAGTCGGCATGGATGTTCACAAAGCCCTTTACCTGGGAACTGTGGATGGTTACAGGTGCCATTTTGATTTACACAATGTTAGCAGTTTGGTATCTTGAAAGAGAATTCAATCCTGAGTTTCATGGCAATTGGAAGAACCAGATCAGCACAGCTCTTTGGTTTACCTTCTCCTCTTTGTTCTTCGCTCATAGGGAGAAAATGCATAGCAACTTAACTCGCATGGTGATGGTCTCATGGCTCTTGCTAGTTCTGATTCTTACCTCATGCTACACTGCTAGTCTTTCTTCAATGCTCACAGTTAAACAACTGCAACCAAATGTCAGAGACATTCAGTGGTTGAAGAGGAACAACATGAAAATTGGTTGTGATGGTGACTCCTTTGTTAGGTCATTCCTGGAGAAAGTAGAAAAGTTCAAGCCTGAGAACATAAAAAATGTTACTGATGAATACAAGTATGATGATGCATTTAAAAATAACACCATAGCAGCTGCCTTTCTTGAACTCCCATATGAAAAAGTATTCATTAGTGAGCACTGCAACAGATACACTGGTTCCACTCCCAGAACCAGATTTGGAGGATTGGGCTTTAAAGGCTCACCAGTGGCTAGAGACGTGTCAAAAGCTATATTACATCTCTCAGAAAAAGCAGAGCTGAAGAGATTGGAAGAGAAGTGGTTGATTACCTCACAGAAGTGCTCCAACACGACCTCCGACAATACGGAAAGTTTGAAGCTGAGAAGTTTATGGATTCTATATGTCATCTCTGGTGCCACTTCCACCATTTGTCTGGTACTATCAACCATCCAGTCTCTAGTAAAATCCTGTCACCAATGTCAAGCTGTGGCACCAGAAGAAGGCAATGACACACCAAGTGATCATAATGTGTGGGAAAAGGTGATTACACATGCAAAGCAGATTTTTAACAAAAAGATCAATAATTCAAGTGAGGCACAGGAACAGGTTGTAACTGATTGTTCTTCTAGATGGGATCATGTGAGCATGAACGATTCCCCTGAGCATCAGCATGAAATGGCTTCTCCAGTACCCGGAATTTTAATGCTCCCTTCTCCACCACCAGAGGTTCAGATGACAACTCATGATTTAGGAATCACCAACACTTCAAAGTAG 1221 0.4144 MTILEERMQYVDFTVPYAESGLSMIVPSKSKESAWMFTKPFTWELWMVTGAILIYTMLAVWYLEREFNPEFHGNWKNQISTALWFTFSSLFFAHREKMHSNLTRMVMVSWLLLVLILTSCYTASLSSMLTVKQLQPNVRDIQWLKRNNMKIGCDGDSFVRSFLEKVEKFKPENIKNVTDEYKYDDAFKNNTIAAAFLELPYEKVFISEHCNRYTGSTPRTRFGGLGFKGSPVARDVSKAILHLSEKAELKRLEEKWLITSQKCSNTTSDNTESLKLRSLWILYVISGATSTICLVLSTIQSLVKSCHQCQAVAPEEGNDTPSDHNVWEKVITHAKQIFNKKINNSSEAQEQVVTDCSSRWDHVSMNDSPEHQHEMASPVPGILMLPSPPPEVQMTTHDLGITNTSK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00754 406 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 338 IPR015683 -
Pumo2g00754 406 Pfam Bacterial extracellular solute-binding proteins, family 3 1 257 IPR001638 -
Pumo2g00754 406 SUPERFAMILY Periplasmic binding protein-like II 1 257 - -
Pumo2g00754 406 Gene3D - 29 178 - -
Pumo2g00754 406 FunFam Glutamate receptor 34 172 - -
Pumo2g00754 406 Pfam Ligand-gated ion channel 258 287 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00754 Pumo-Chr2 11797798 11799988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00754 1 307 Ion Channels AT2G29120 38.907 8.31e-65 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00754 - - gmx:100818619 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00754 2 11797798 11799988 Pumo2g00754 2 11797798 11799988 ECH