Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00753 ATGAATTTTCATGCCCAAACTTCCAAAGCACTTTCAAATCTTTTGCTTTGGCCTTCTCTAACAACCTTGCTTCTCCTTATTGGAGCTCAGGTTGCCTACAGTTTCCAAAATACAAGTGTTGGCGTGGTCATCGATGTCAATTCAGTGGCAGGAAAACAACAGAGAAGAGCCATGCAAATTGCAGCTCAAAGTTTCAATAATAATTCAGAGAATCATAACATAAACCTTTTCTTCAGCGACTCTGGTGGAATCCCATTACAAGCAGCTTCAGCTGCTGAAGAACTAATCACGAAGAAGAAAGTTAAAGTCATTGTTGGCATGGGGACATGGCAAGAAGCAGCTCTAGTTGCTGACCTTGGAAACAAAGCTCAATTACCAATTATTTCATTTGCTTCTCCCCCAATAATCCCTCCTTTAATGCAACATCGTTGGCCTTTCTTGATTCAAATAGCTAAAGATCAGGCTGCACACATGAACTGCATAGCAGATATTATCCATGCGTACAACTGGCAAAAGGTTATAACTATATATGAAGACAACCCTTATAGTGGTGATTCTGGATTGTTAAGCCTCTTTTCTGAGGCTCTCCAAAAGGGTAACGCGCAGATTGAGAACCGATTAGTTCTTCCACCATTCACTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAATTGCTTAAGCTGCTGCCACTAAAATCTCGTGTTTTTGTTGTACTTCAAGCATCATTCCCTATGGTAACTCACTTGTTCAGAGAAGCCAAGAAGGTTGGATTCTTGGGGAAAGATTCAGCTTGGATAATCAATGAGGGGATCACAAGTATGTTGGACTCTGCAAATAAATCTGTTTTATCCTCTATGGAAGGTACTTTGGGAATCAAAACCTACTATTCTACAAATTCTACTGCCTATACTCATTTGCAGGAAAATTTCCAATCTGAGCATGCTGAAACAGCAGGCTCTAAACCAGGATCAGATGCATTACGAGCTTATGATAGCGTTACAATCATTACAAAGGCCATGGAGAAAATGAATAGCAAATCTAGTAACTCAAGGGTGTTCTTGGAGAAAATGTTATCTAGCAATTTCAATGGTTTAAGTGGTAATTTAAGATTCAAAGAAAGTCATCTATCCAACACTCCAGTATTGAGAGTCATAAATGTGGTTAATAAGGAATACAAGGAATTGGACTTTTGGACCCCAAAATTGAAGTTCGCTAGATCTCTTGAAATACTGAAAGACAGAGAGACCAGGGGTGATTATGCTACAAATAACTTAACTGGCCCAGTGGTTTGGCCAGGAGGCCTAATTTCTGCTGATCCTAAGGGATGGGAAATGCCTACCGAAACAGAACCTTTAAAAGTGGCAATTCCTACAAACCCTGCTTTTGATAATTTTTTGAAGGAAGACTCCCAAAAGAATTATAGTGGTTTCTGTATTGAGCTTTTCTGCAAGGCACGAGAAATTCTGAGTGACAAGTATTCTGGGATGCCTTATGTGTTTCACCCCTTCAATGAACCCTATGATGAACTGCTACAGAATGTCATAAACAAGTCCCATGATGTTATCGTAGGAGATGTAACAATACTTGCCGAACGATCAAAGAATGTGTGGTTTACTCAGCCATACACTGAATCAGGCTTATCACTTATTCTTCCAATAGAGACTGAAGGATCAGCTTGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGATTGCAACTATTGGAATCCTCTTCTACACAATGTTTATCATATGGTTCCTGGAGCATCACTTGAATCCAGATTTTGGTGGACCATTGAAAAATCAGATCAGCACCACGCTGTGGTTTGCTTTTTCTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACTCTGCACGAGTAGTAGTTGGAGTATGGCTATTTCTTGTGTTTGTTCTAACCTCAAGCTACACTGCTAACCTTTCGTCAATGCTTACTGTCAAACGATTGAAGTCTGGAAGAGATATTGAGTGGCTAAAGCAAAACAATTTATCAGTTGGTTGTGATATCAGCTCCTTTGTAAAGAACTACATCATAAACGTGTATGATTTCCATCCACAGCAAATAATAGAGGTCGATGGAGAACATGACATTTTGGATAAATTCAAAAGAAAAAAAATATCTGCTCTCTTTCTTGAGAGCCCGTATGAGAAGGTCTTCTTGAATAAGCATTGCAAGGATTACACTGCAATTACAGCTGCAAATAAATTTGGAGGACTGGGCTTTGTATTTCAAAAAGGATCTCCCATGGCAAGAGACTTTTCTGAAGCCATTCTAACGCTAGCGGAAAATGGAACACTAAGAGATTTGGAAGAGAAATGGTTGACCCCTTCCAAGGAATGCTCCAACGGCTCAACATCTCCAGAAACTGAGAGCCTGACCCTCCACAACTTTTGGGGTCTCTATATCATATGTGCTGCCATATCCACCATATGCTTTGTGCGCGCCTTATTGACGAAATACTTACATAATCATAACCATTATCATCACGAAGAGAAAGCTCAACTTCAAGGCAATATAACCGCTAATGATGATAGTGTTTGGAAGAAGGCAATTAGAATCAGTACAGGCTTTTACAATAATGTGAATAACAAAACTTTAGGTAGAGCTGCAACTTTTGGTGGAACACACAAAATGCATTTCCTTTCAACCATTCCTCAAGCACTAGCAATGACTGGGCTCTTCTTTTATTTACTTATCTCCCTTCCTCTTATTAATGGCTACCAAGATGAAGCTACAAATGCAGACAACAAAGTTATATCTATAGGGGCAATCATTGATGTGAATTCTCGCATTGGGAAAGAACAGCAAGTAGCCATGGACATTGCAGCTCGAAGTTACAAAAGCACTTCAAAGACCTACAAGTTGGCTCTCTATTTTCAGAACTCCACCAAGGATCCCCTCAGAGCCATCACTCTCGCTGAAGAGATGATTCATAAGCAAAAGGTGCAAGTGATTATAGGGATGCACAGATGGTCAGAAGCAGCTCTAGTGGCTGAAATAGGAAGCCAAGCTCAAGTTCCGATCCTAGCATTTGCAGAACCTACCATTACCCCACCATTGATGACAGCGCGATGGCCTTTTTTGGTGAGACTGGCCAACAGTAGTACAACATATATCAAATGCATTGCAGATATAGTGCAAACTTATAGTTGGCAGAGAGTAGTTGTCATCTATGAAGATGATGCATATGGCGGAGATTATGGTATGCTAGCACTGCTATCTGAGGCCCTCCAGGATGTAGGTTCAATGATTGATTACCACTTAGTTCTTCCACCTATTTCTTCTCTACATGATCCAGGACGGCTTGTGCGTGAAGAGTTGCTTAAGCTGTTGCAAAAGCAATCTCGCGTCTTCATTGTGCTACAATCTTCATTAGAAATGGCAATTCATTTGTTTAAAGAAGCCTCGAAAATGGGACTTGTGGACAAAGAATCAGCTTGGATACTCCCAGAGAGCATATCTAATTTGCTGGACTCTGTCAACAAGTCTGCTATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCCGAAATAAGCACCGAGTATCAAAACTTTGAGGCTCAGTTCCGGAGAGCCTTTTGGCCCAAGAATGCTGAGGAAGATAACCGCTACCCAGGATTTTATGCTTTGCAAGCATATGACAGCATTAAAATTGTGACTGAAGCAGTAGACGGAATGGCCAGTAGAAACACTAGCAGCCCAAAGAATTTACTAAGAGAAATACTGTCTAGCAACTTTCTTGGTTTAAGTGGTCAAATTCAATTTGAAGATGGACAACTCTTGCAGAATCCTATTTTGAGGATAGTAAATGTAGCTGGGAAGAGTTACAAGGAACTATGCTTTTGGAGTCAACAACAAGGGTTCACCACAAACCTCCCTACAGGACAAGGTGGATATAATGTTGCTGGTAATACAAAATGTTTCAATGGTGTACGCTGGCCTGGGGATCTGAAGCATGATCCAAAGGGCTGGAACATGCCTACTAAACAGAATCCATTGAGAATCGCAGTCCGAAGCAGAACCTCTTTTTCCAAGTTTGTCAAGGTTGATTATGATCATAATGGAAAACCTGCAACATATAGTGGATTCTGCATTGATATTTTTCAGAGTGTGCACGACCTTTTGGGGTATGACTTGCCATATCGGTATTATCCCATTGATGGTACGGTACCTACAATGATTTGGTTCAGCTTGTCTATAACAAGGTATCAAATCTCTTTCCCTTATTCCCCGCTCCGATAG 4284 0.4041 MNFHAQTSKALSNLLLWPSLTTLLLLIGAQVAYSFQNTSVGVVIDVNSVAGKQQRRAMQIAAQSFNNNSENHNINLFFSDSGGIPLQAASAAEELITKKKVKVIVGMGTWQEAALVADLGNKAQLPIISFASPPIIPPLMQHRWPFLIQIAKDQAAHMNCIADIIHAYNWQKVITIYEDNPYSGDSGLLSLFSEALQKGNAQIENRLVLPPFTSLSDPKGFVLDELLKLLPLKSRVFVVLQASFPMVTHLFREAKKVGFLGKDSAWIINEGITSMLDSANKSVLSSMEGTLGIKTYYSTNSTAYTHLQENFQSEHAETAGSKPGSDALRAYDSVTIITKAMEKMNSKSSNSRVFLEKMLSSNFNGLSGNLRFKESHLSNTPVLRVINVVNKEYKELDFWTPKLKFARSLEILKDRETRGDYATNNLTGPVVWPGGLISADPKGWEMPTETEPLKVAIPTNPAFDNFLKEDSQKNYSGFCIELFCKAREILSDKYSGMPYVFHPFNEPYDELLQNVINKSHDVIVGDVTILAERSKNVWFTQPYTESGLSLILPIETEGSAWLFMKPFSWEMWIATIGILFYTMFIIWFLEHHLNPDFGGPLKNQISTTLWFAFSSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTANLSSMLTVKRLKSGRDIEWLKQNNLSVGCDISSFVKNYIINVYDFHPQQIIEVDGEHDILDKFKRKKISALFLESPYEKVFLNKHCKDYTAITAANKFGGLGFVFQKGSPMARDFSEAILTLAENGTLRDLEEKWLTPSKECSNGSTSPETESLTLHNFWGLYIICAAISTICFVRALLTKYLHNHNHYHHEEKAQLQGNITANDDSVWKKAIRISTGFYNNVNNKTLGRAATFGGTHKMHFLSTIPQALAMTGLFFYLLISLPLINGYQDEATNADNKVISIGAIIDVNSRIGKEQQVAMDIAARSYKSTSKTYKLALYFQNSTKDPLRAITLAEEMIHKQKVQVIIGMHRWSEAALVAEIGSQAQVPILAFAEPTITPPLMTARWPFLVRLANSSTTYIKCIADIVQTYSWQRVVVIYEDDAYGGDYGMLALLSEALQDVGSMIDYHLVLPPISSLHDPGRLVREELLKLLQKQSRVFIVLQSSLEMAIHLFKEASKMGLVDKESAWILPESISNLLDSVNKSAISYMEGALGIKTYYSEISTEYQNFEAQFRRAFWPKNAEEDNRYPGFYALQAYDSIKIVTEAVDGMASRNTSSPKNLLREILSSNFLGLSGQIQFEDGQLLQNPILRIVNVAGKSYKELCFWSQQQGFTTNLPTGQGGYNVAGNTKCFNGVRWPGDLKHDPKGWNMPTKQNPLRIAVRSRTSFSKFVKVDYDHNGKPATYSGFCIDIFQSVHDLLGYDLPYRYYPIDGTVPTMIWFSLSITRYQISFPYSPLR 1427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00753 1427 Gene3D - 1341 1412 - -
Pumo2g00753 1427 Gene3D - 447 560 - -
Pumo2g00753 1427 SUPERFAMILY Periplasmic binding protein-like II 1327 1406 - -
Pumo2g00753 1427 FunFam Glutamate receptor 157 321 - -
Pumo2g00753 1427 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 842 IPR015683 -
Pumo2g00753 1427 FunFam Glutamate receptor 560 689 - -
Pumo2g00753 1427 Pfam Bacterial extracellular solute-binding proteins, family 3 468 786 IPR001638 -
Pumo2g00753 1427 SUPERFAMILY Periplasmic binding protein-like II 435 786 - -
Pumo2g00753 1427 Pfam Ligand-gated ion channel 787 816 IPR001320 GO:0015276|GO:0016020
Pumo2g00753 1427 CDD PBP1_GABAb_receptor_plant 39 409 IPR044440 -
Pumo2g00753 1427 Gene3D - 732 793 - -
Pumo2g00753 1427 Gene3D - 1045 1300 - -
Pumo2g00753 1427 CDD PBP1_GABAb_receptor_plant 931 1306 IPR044440 -
Pumo2g00753 1427 SUPERFAMILY Periplasmic binding protein-like I 927 1336 IPR028082 -
Pumo2g00753 1427 Gene3D - 932 1276 - -
Pumo2g00753 1427 Gene3D - 158 319 - -
Pumo2g00753 1427 SMART GluR_14 454 787 IPR001320 GO:0015276|GO:0016020
Pumo2g00753 1427 Gene3D - 36 157 - -
Pumo2g00753 1427 FunFam Glutamate receptor 729 792 - -
Pumo2g00753 1427 Pfam Receptor family ligand binding region 55 389 IPR001828 -
Pumo2g00753 1427 Pfam Receptor family ligand binding region 948 1286 IPR001828 -
Pumo2g00753 1427 Gene3D - 561 694 - -
Pumo2g00753 1427 FunFam Glutamate receptor 1049 1217 - -
Pumo2g00753 1427 SUPERFAMILY Periplasmic binding protein-like I 40 443 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00753 Pumo-Chr2 11782335 11797459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00753 40 837 Ion Channels AT2G29120 32.936 9.22e-126 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00753 - - gmx:112997619 1540.01