Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00719 ATGTCAACTCCTTCATCATCATCATCTTCTTCTATTTGGGTGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATCAGAAGGTTTCTCCAATCCAAAGCAACCAGAAAGCGTTGTGACACCTCTGATCGGTTTGACACAGCTAAGAGCAGAGGTGAACACAACAACAAGGTTGGAAATCTTGAAACGGTTCAAGTTATGGAGAAGCATAAAGAGGAGGTAGAGGAGGAGGAAGAGTCTGCGATCATGTTGCAGAGAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAAGTGGCAGCAAAGGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTCAGAAAACTGATAACAGAACTTGGGGTGGTGCCGGAATTGGTATCTATGCTGGTGTCTCCGGTGGCTAGCCGCCGGCAAGCCGGGTTAACCGCGTTGATCCACCTAGCTGATGGAACTTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATCTTGTCCAAGCTGCCTAAGACAATTGACCTTGTAGATGAATCAACAAGAAGTAAATTGGCAGAGTTGCTTTTGTCATTGTCATCTCTAGCAAACACTCAATTCCCTCTTGCTTCATTAGACTTTCTACCATTACTTAGAAACATTCTCGAGACAGGCTCAAGTTTTGACACCAAAACTTCGTGTTTGGGTGCCTTACATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGATGGTCCCTATCCTCTTGGAACTGTCCTCAATAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGAAAGAAAGCAATAGAGAACAATTCAACGGTGCCAGAAACCTTTATTGAGATCTTGTCATGGGAAGACAAACCCAAATGCCAAGAGTTGTCAGTGTATATTTTGATGATTCTAGCACATCAAAGCTCATTGCAAAGAAAGAAAATGACACAGGCAGGGATTGTTCCTGTGCTTCTTGAAGTGGTTTTATTGGGGAGCACTTTGGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAGAGGCAAACAAAAATGGGTCCACATTCCGGTCCACAAACACCAAGATTTGCAATGGGGTCACCTGTAAATCAAAGAGAAGCAAAAGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAACAAAGTTTGCATAGGAATATGGAAATAATAACGCAGAGGGCAAATGCAGCAGGGGAGTCTTCAAAATTGAAGTCTTTGATCATTAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1317 0.4267 MSTPSSSSSSSIWVLSNIKLQFFARIRRFLQSKATRKRCDTSDRFDTAKSRGEHNNKVGNLETVQVMEKHKEEVEEEEESAIMLQRTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPELVSMLVSPVASRRQAGLTALIHLADGTYTNKALIVEAGILSKLPKTIDLVDESTRSKLAELLLSLSSLANTQFPLASLDFLPLLRNILETGSSFDTKTSCLGALHNLSTVLENACPLVSSGMVPILLELSSIKEISEKALATLGNLSVTLMGKKAIENNSTVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMTQAGIVPVLLEVVLLGSTLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPVNQREAKEGKKLMKSLVKQSLHRNMEIITQRANAAGESSKLKSLIISTSSKSLPY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00719 438 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 438 - -
Pumo2g00719 438 Coils Coil 60 87 - -
Pumo2g00719 438 Gene3D - 58 419 IPR011989 -
Pumo2g00719 438 MobiDBLite consensus disorder prediction 365 391 - -
Pumo2g00719 438 SUPERFAMILY ARM repeat 88 358 IPR016024 -
Pumo2g00719 438 SMART arm_5 113 153 IPR000225 GO:0005515
Pumo2g00719 438 SMART arm_5 238 276 IPR000225 GO:0005515
Pumo2g00719 438 SMART arm_5 196 237 IPR000225 GO:0005515
Pumo2g00719 438 SMART arm_5 155 195 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00719 Pumo-Chr2 11348213 11351781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00719 57 374 U-box Gene Family AT1G27910 28.049 2.06e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00719 - - gmx:100813828 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00719 2 11348213 11351781 Pumo2g00719 2 11348213 11351781 ECH