Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00711 ATGACGCGAGCCACTCACACACTGGGGGTTCCCCCAACAACACGCGCCCCTCCCCGGCGACCGTACCGTATTATCCCCCACCTTCCCACTCTTTCGCCTTGCCGTTTCGCTTTCTCTCTCTTTCTCTTTCCCCTTTCACTTTCTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCCCCGAACCCTAATTTTTCCTTTTTCCGATGCCGGACTTCCACGACTCCCTTACGCCGCCGTCGCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCGCCACGCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTTGCCGACTGCCGTCAACGCGCTCCACGGCCACACCAAAAAGACGCACCGCACCGACGTCCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGGCTTCCAACGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGACGCTCTAATCGGTCCTAATTTTAACGCCAAAAAATCAACCTCTTCGCCGTCTCCCTCGCCGCCGGTGGCTCTTCCGCTTCTGCCGCATCGGAAGAACCTGAACCCTTCCTCTTCTCCTGCGATTGCGGTGCCGCCGACGGCCGTGGCGCTGCCGCAGAAGCGCTCCGCCGCGGCGGCGGCGATGGACGAGGGTTACTTCAGGAGGAATTACTCCGCCGTGGCAGCCGCGGCGGCGGCGGCGGAGGCTGATGAGGAGGATGAGGAGGAAGATGAGGAGGAGGCGGAGGAATTGGAGGAGGAGGAAGAGGATGAAGAGGAAGGGAGAGGGAGCGAAGTGGAGGAAGGAGAGAAGGAGAGGGAAGGGATGAAGAGGTTGGCGAAGGCGATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAAAGATCTGGCTCTAACGATATGTATAGCTAG 1113 0.5831 MTRATHTLGVPPTTRAPPRRPYRIIPHLPTLSPCRFAFSLFLFPLSLSLSSSSSSSSSPNPNFSFFRCRTSTTPLRRRRAPSPSARTAGPRRPPPRSSTPGAAATSSSTAATSARRTGRTLPTAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGTLSSSWPFYERLDALIGPNFNAKKSTSSPSPSPPVALPLLPHRKNLNPSSSPAIAVPPTAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEEDEEEDEEEAEELEEEEEDEEEGRGSEVEEGEKEREGMKRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00711 370 MobiDBLite consensus disorder prediction 258 289 - -
Pumo2g00711 370 Coils Coil 253 285 - -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 99 119 - -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 1 22 - -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 254 300 - -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 52 78 - -
Pumo2g00711 370 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 124 361 IPR044823 -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 188 221 - -
Pumo2g00711 370 MobiDBLite consensus disorder prediction 52 119 - -
Pumo2g00711 370 Pfam Myb/SANT-like DNA-binding domain 132 180 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00711 Pumo-Chr2 11251512 11256774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00711 272 369 Trihelix Transcription Factor Family AT3G14180 43.137 5.16e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo2g00711 Myb_DNA-bind_4 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00711 - - gmx:100815241 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00711 2 11251512 11256774 Pumo2g00711 2 11251512 11256774 ECH