Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00703 ATGTCAGAAGGGTATGAGATTCACAACAACGAGGAAACATCATCGGGATGTTCCCAGAAATGCTCTTCATTTGATTTGAATGAAGAGTTAGCTTGCAGTGAAGATAACAGTGATACAGAAGAGTGCTATGAGCTCACAACCAAGGAGGAGAGTGAGAAAGCAAAGGATGAGGGCACTTCAGCAAGAGAAGGAAGTGAGAGAAGAGGAACGGTGAGACAATATGTTAGATCCAAAATGCCTCGGCTTCGGTGGACTCCTGAGCTTCATCATTCATTTGTGCATGCTGTTGAAAGACTTGGTGGTCAAGAGAGAGCTACACCCAAGTCGGTGCTTCAACTAATGAATGTGCGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAGGCTGGGCAAGTACTAAGTCAAACGTACAGGTCCAACCAAGAAGTGGGTCGTAGACCTCTGATACTTCATCAGTCCATAAGTCCTCAACAACATCTTAAGATGGGGAATGGTGGAATTATTCTAGCGAGTAATTTCAACAAACATACTCATTTCCCAAGTCTTCTGCAGCCCTCCTTCTCCCTATCACGTTCACATACATACGACACCGATTCAAGGCACCAGCATTGGCACATCAATCATCAAGCTTTTAGAATACCAATAGCTTCAGGCCAAATTCAACCAAAGGATACACGTGGCAGAATTGCCCCCATGAGACCAAGTCAATTGCTTGAAGAGAAAAGGTGGCCTCCGTTAGAAATGATGAACAATCATCAATTGAAGTTCCAAAAGTTACCTGCCATTGTTGCTCCTAAATATGGGTCACAAGTTGTTCAGCCAGCTGAATGGAGTTTTGTGAACAACACAACCATCAGAGATTATCTATCGACCAACTCCAATGAACCTCGCAACAATTCCAACAGTACTTTAAAGCTAGAATTTGATCCTCCATTTTGGATTAAGAAAGACGAGCAACAATTACCTGATTTGCAACTGGGTTTGAGTCACACAGTTGGAACCGATGGCAAGATGAATCATTATAGAGAAACCCCAGAAATCAGCACTAAGCTTTCACTTTCTTAG 1095 0.432 MSEGYEIHNNEETSSGCSQKCSSFDLNEELACSEDNSDTEECYELTTKEESEKAKDEGTSAREGSERRGTVRQYVRSKMPRLRWTPELHHSFVHAVERLGGQERATPKSVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSQTYRSNQEVGRRPLILHQSISPQQHLKMGNGGIILASNFNKHTHFPSLLQPSFSLSRSHTYDTDSRHQHWHINHQAFRIPIASGQIQPKDTRGRIAPMRPSQLLEEKRWPPLEMMNNHQLKFQKLPAIVAPKYGSQVVQPAEWSFVNNTTIRDYLSTNSNEPRNNSNSTLKLEFDPPFWIKKDEQQLPDLQLGLSHTVGTDGKMNHYRETPEISTKLSLS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00703 364 FunFam Myb family transcription factor 78 136 - -
Pumo2g00703 364 MobiDBLite consensus disorder prediction 345 364 - -
Pumo2g00703 364 MobiDBLite consensus disorder prediction 35 70 - -
Pumo2g00703 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 56 173 IPR046955 GO:0003700
Pumo2g00703 364 Gene3D - 79 136 - -
Pumo2g00703 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 80 135 IPR006447 GO:0003677
Pumo2g00703 364 MobiDBLite consensus disorder prediction 41 70 - -
Pumo2g00703 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 136 IPR017930 -
Pumo2g00703 364 SUPERFAMILY Homeodomain-like 78 134 IPR009057 -
Pumo2g00703 364 Pfam Myb-like DNA-binding domain 82 132 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00703 Pumo-Chr2 11144318 11149455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00703 44 151 G2-like Transcription Factor Family AT2G42660 56.481 1.08e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo2g00703 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00703 - - gmx:102669757 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00703 2 11144318 11149455 Pumo2g00703 2 11144318 11149455 ECH
Pumo2g00703 2 11144318 11149455 Pumo6g01079 6 14241663 14248324 ECH
Pumo6g01079 6 14241663 14248324 Pumo2g00703 2 11144318 11149455 PCT