Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00701 ATGAAGAACCCCGTCGCGGAGAGATTCTCCGAGTTCTACGACAAGTGGGTTTGGAAGCTCGAGGAGATCCTCCAACAGCTTCTCGAGGTGTCCAAGCAGAGAACCGAGGTGGTCAAAACCGAGCAAGAGCTGCAGGTTTTGGTGTCCAAGGTCACGTCCCATTTGAAGGAATATTATACCGTGAAATGGGCTGCGGCACATGAAGACGTTCTGGTTTTCTTTTCGCCGGCGTGGCTGAGTCCTTTGGAGAATGCTTATCTCTGGATGACGGGGTGGAAGCCCTCCATGGCGTTCAAGCTTCTGGAAACCATTAAGAAGCCGAATAATGCTGCTACTTTTCTGATGACGGAGGAGCAGGTGAGGAAGATTGAGGAGCTGAGGAAGAGGATAAGGATGGAGGAGGAGAAGGTCGAGAGGGAGATGGAGAGGCACCAGGTCGCCATGGCTGACCGCAAGATGGTCGAGTTGGTCAAGTTGACAAGCCGAGCAAGGAACGGTGGTGGTGGTGGTGGTGATGCGGTGGTGGAAGTGGCCTTGAAAGGGGTTCTTGCAGGGTTGGAGAGGGTCATGAAGGCTTCCGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGTTGGATGTGCTTGGTCCAATGCAGAGTGTGGACTTCTTGGCTGCGAATATTGCTATGCAGCTGCGTCTCAGGCAATGGGGGAAGAAGAAGAGGGACATGATGGCTGGGTCCACACTCAATGTGAATCAGGACAAGTGA 750 0.532 MKNPVAERFSEFYDKWVWKLEEILQQLLEVSKQRTEVVKTEQELQVLVSKVTSHLKEYYTVKWAAAHEDVLVFFSPAWLSPLENAYLWMTGWKPSMAFKLLETIKKPNNAATFLMTEEQVRKIEELRKRIRMEEEKVEREMERHQVAMADRKMVELVKLTSRARNGGGGGGDAVVEVALKGVLAGLERVMKASDCVRLKTLKGVLDVLGPMQSVDFLAANIAMQLRLRQWGKKKRDMMAGSTLNVNQDK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00701 249 Coils Coil 116 147 - -
Pumo2g00701 249 ProSiteProfiles DOG1 domain profile. 6 237 IPR025422 GO:0006351|GO:0043565
Pumo2g00701 249 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 242 - -
Pumo2g00701 249 Pfam Seed dormancy control 26 102 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00701 Pumo-Chr2 11111626 11112375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00701 9 228 bZIP Transcription Factor Family AT3G12250 29.545 2.55e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00701 - - gmx:100808459 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00701 2 11111626 11112375 Pumo2g00701 2 11111626 11112375 ECH