Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00698 ATGAAGCACTTTCACACATTCTTCATTCTCGTGGCACTGTTTGTTCTCGTGGAATCTGAATCTTCATGCAAAGACCAGGAGCTGGTGTCAAAGGCCTTCCAATCTGTGTCTGCATTCAACTCTTCCTGGTTCCAAAGTGGTTCCAACTGTTCAAATGCTGAGATTAAAGGGATAAATCTTTCGTCCAAAAACCTAAGTGGGAACATCTCATGGAAGTATCTGAGGAACATGTCCAAGTTGGAGGTTCTAGATCTGTCTGGGAATTTTCTACAAGGCCAGGTCCCAAACTGGTTTTGGAAAAGCTCAACCTTATTAGAAGTGAACCTTTCCAACAACAGGTTCGGAGGGAGCATTAACCCCACTTCCCAAAACGGTTTCTTTTCGTCACTGCAAAATCTCAACCTCTCACACAACAGTTTCCCCTCTGATTTCCCTCCTCTGAACAACATCAAATTCTTGAACATCTCCGACAATAACTTCAAAGCATCCACCACCTTAGACAGGTTCAAAAAGTTCGGGAAATCAGCGTTCATTCACGCCGGGCACAACTTCAACTACAACTACAACGCATCCAAAACGCCAAAGCTTCATTCAACTTCATCAAGCCCACCAAACCAACAGGCCCACCACATTCACGCGGAGGAGAAGAAGAAGAAGCGGCCAAAAGAAAAACAAAAGTCAAAACGCAAAACCAGAAGCATGATTGCGGGCTTGTCCTGTGCCTCGGCACTTGTCGTTGTCGCGTTGTGCATGTGCTTGGTGTGGTGGTGCTGCAGAAGGAAGAGGGAATTGGCGAAAAGGAACAAGTGGGCGATCTCGAAGCCGGTCCCACTGAGCATCAAGATGGAGAAATCAGGACCGTTCGCGTTCGAGACCGAGTCAGGGACATCCTGGGTCGCTGACCTCAAGGAACCCTCTTCCGCACCCGTGGTCATGTTCGAGAAGCCACTCATGAACCTCACCTTCGTCGACCTCCTCGCTGCCACCTCACACTTCGGCAAAGACTCTCTCCTCGCTGAGGGCAGGTGTGGGCCCGTCTACCGCGCTGTCTTACCTGGAGACATCCACGTGGCAATCAAGGTCCTCGAAAACGCCAGAGACATCCATCATGATGACGCTGTCACTCTCTTCGTTGACCTCTCCCAACTCAAACATCCCAATCTATTGCCCCTCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTGTTGTATGAGTTTATGTCGAACGGGGATTTAGGTAGGTGGTTGCAGGAGCTACCAACAGGGGGAGACTAA 1278 0.4922 MKHFHTFFILVALFVLVESESSCKDQELVSKAFQSVSAFNSSWFQSGSNCSNAEIKGINLSSKNLSGNISWKYLRNMSKLEVLDLSGNFLQGQVPNWFWKSSTLLEVNLSNNRFGGSINPTSQNGFFSSLQNLNLSHNSFPSDFPPLNNIKFLNISDNNFKASTTLDRFKKFGKSAFIHAGHNFNYNYNASKTPKLHSTSSSPPNQQAHHIHAEEKKKKRPKEKQKSKRKTRSMIAGLSCASALVVVALCMCLVWWCCRRKRELAKRNKWAISKPVPLSIKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFVDLLAATSHFGKDSLLAEGRCGPVYRAVLPGDIHVAIKVLENARDIHHDDAVTLFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPTGGD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00698 425 MobiDBLite consensus disorder prediction 213 231 - -
Pumo2g00698 425 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 53 418 IPR046959 -
Pumo2g00698 425 MobiDBLite consensus disorder prediction 194 208 - -
Pumo2g00698 425 Gene3D Ribonuclease Inhibitor 15 190 IPR032675 -
Pumo2g00698 425 MobiDBLite consensus disorder prediction 194 231 - -
Pumo2g00698 425 Pfam Protein tyrosine and serine/threonine kinase 336 419 IPR001245 GO:0004672|GO:0006468
Pumo2g00698 425 ProSiteProfiles Leucine-rich repeat profile. 129 151 IPR001611 GO:0005515
Pumo2g00698 425 ProSiteProfiles Protein kinase domain profile. 332 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00698 425 SUPERFAMILY Protein kinase-like (PK-like) 309 420 IPR011009 -
Pumo2g00698 425 SUPERFAMILY L domain-like 41 165 - -
Pumo2g00698 425 FunFam Putative LRR receptor-like serine/threonine-protein kinase 293 407 - -
Pumo2g00698 425 Pfam Leucine rich repeat 59 114 IPR001611 GO:0005515
Pumo2g00698 425 Gene3D Phosphorylase Kinase; domain 1 292 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00698 Pumo-Chr2 11052988 11054869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00698 58 418 Receptor kinase-like Gene Family AT5G07280 26.486 3.12e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pumo2g00698 PK_Tyr_Ser-Thr 4.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00698 - - gmx:100778920 502.286