Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00695 ATGGCAGAGGATAAGACTATTAGTTACATGGCAGAACGAGTTGTAGGAACTGGATCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCCATTAAAAAGGTTTTACAAGACAGAAGATACAAGAATCGTGAACTACAGTTGATGCGTGTTTTGGATCATCCAAATGTGATCTCTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAGCTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTCATAAAGCACTATACAAATGCTAATCAAAGAATGCCAATCATCTATGTAAAACTTTATATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGACTTGAAGCCTCAAAATATACTGGTGGATCCTCTTACACACCAAGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTAGTCAAAGGAGAAGCTAATATATCATACATATGTTCACGATTCTATCGTGCTCCAGAACTTATATTTGGTGCCACAGAGTATACAACTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGCCAGCCATTATTCCCTGGCGAAAATGCAGTAGACCAGCTTGTACATATTATAAAGGTGCTTGGCACACCCACTCGAGAGGAAGTACGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCATCACGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCTCGCCTGCCAAATGGTCGTCCATTTCCTCCTCTGTTTAACTTAAAACAGGAATTATCCGAAGCATCTCCAGAGCTTGTTAATAGGTTGATACCGGACCATGTGAAGCGGCAAATAGGGCTACAATTTGTTCGTCCGGCAGGATCATGA 1050 0.4143 MAEDKTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVLDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVIKHYTNANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVKGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNLKQELSEASPELVNRLIPDHVKRQIGLQFVRPAGS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00695 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pumo2g00695 349 ProSitePatterns Protein kinases ATP-binding region signature. 15 39 IPR017441 GO:0005524
Pumo2g00695 349 Pfam Protein kinase domain 9 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00695 349 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Pumo2g00695 349 CDD STKc_GSK3 5 296 IPR039192 -
Pumo2g00695 349 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 4 338 - -
Pumo2g00695 349 SUPERFAMILY Protein kinase-like (PK-like) 8 321 IPR011009 -
Pumo2g00695 349 FunFam Shaggy-related protein kinase kappa 89 336 - -
Pumo2g00695 349 SMART serkin_6 9 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00695 349 FunFam Glycogen synthase kinase-3 beta 1 88 - -
Pumo2g00695 349 ProSiteProfiles Protein kinase domain profile. 9 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00695 349 Gene3D Transferase(Phosphotransferase) domain 1 89 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00695 Pumo-Chr2 11033160 11037603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00695 13 309 MAP Kinase Gene Family AT3G59790 34.740 1.05e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pumo2g00695 Pkinase 6.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00695 K14502 - gmx:100810085 699.123