Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g00694 | ATGGAAGATGTCAAAGTTGTTGCTTGGCTCATTTCACTTTTTCTCTGGAATTGGGTGCTTGTTGTTGATAGCACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCTGCTTTGATGTCCATGAAGAGTAAGATGAATGATGAGTTGCATGTCATGGATGGTTGGGATATTAATTCGGTTGACCCTTGTACTTGGAACATGGTTGGTTGCTCTCCAGAGGGTTATGTCACTTCCCTGGAAATGACCAGTGAGGGTTTATCTGGAACGATTTCCTCAGGAATTGGAAATTTGAGCCACCTCCGAACATTGTTATTGCAGAACAATCAGTTATCTGGTCCTATCCCGACTGAGATAGGAAAGTTGTCAGAGCTTCAAACCCTTGACCTTTCTGGTAACCAGCTTGATGGGGAAATTCCTAATTCTTTGGGCTTTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATACATTATCTGGACAGATCCCTCAGCTTGTTGCTAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTAGCAAAAGGTTATAGTATTTCAGGAAACAACTTCCTCTGCACCTCTTCCTCACAAATTTGTATGGGCTTTTCAAAACCAGTAAATGATACAGGGTCATCTCAGACGACTAGTAGTCATCACCAAAGGGTGCTTGCTGTTGTTATTGGCTTTAGTTGCACATTTGTAATTTCGGTGGTGCTTCTTGTCTTTTGGTTGCATTGGTACAGATCACACGTTCTCTACACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGACATTTGAAGAGGTTCTCCTTCCGGGAATTGCAAATTGCTACTGGAAATTTCAATTCAAAAAATATCCTTGGACAAGGTGGTTTTGGTGTTGTCTACAAAGGATGCCTTGCAAACAAAATGTTGGTGGCAGTAAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAGATGATTGGCTTGGCTGTGCATCGGAACCTCTTGCGCCTTTATGGATTTTGTATGACACCAAATGAAAGGTTACTTGTTTATCCTTACATGCCCAATGGCAGCGTTGCCGATCGCTTGAGAGAGACTTGCCATGAAAAGCCATCGTTGGACTGGAACAGGCGAATGCGTGTTGCTCTTGGGGCAGCGCGTGGGCTTCTATATTTGCACGAACAGTGCAATCCAAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGTTGGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACATGTAACTACTGCAGTGCGGGGTACTGTAGGCCACATTGCCCCTGAATACCTCTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGATTTGGCATATTACTCTTGGAGCTCATAACAGGACACAAGGCACTGGATGCTGGAAATGGTCAGGTCCAAAAGGGAATGATCCTTGATTGGGTTAGAACCTTATTTGAGGAGAAGCGGCTGGAAGTGCTAGTTGATAGGGATCTTAGGGGATGTTTTGATCCAGTAGAGTTGGAGAAAGCAGTGGAATTGTCTTTACAGTGCACTCAGTCACTTCCCACTTTGCGGCCGAAGATGTCAGAAGTTTTAAAGATTCTAGAAGGTCTGGTAGGGCAGTCAATGAGGCCAGAGGAGTCACAAGGGGGGGCTAATCTATATGATGAAAGGACTTGCAGTTTCTCACAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA | 1863 | 0.431 | MEDVKVVAWLISLFLWNWVLVVDSTDSLLSPKGVNYEVAALMSMKSKMNDELHVMDGWDINSVDPCTWNMVGCSPEGYVTSLEMTSEGLSGTISSGIGNLSHLRTLLLQNNQLSGPIPTEIGKLSELQTLDLSGNQLDGEIPNSLGFLTHLSYLRLSKNTLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGFSKPVNDTGSSQTTSSHHQRVLAVVIGFSCTFVISVVLLVFWLHWYRSHVLYTSYVEQDCEFDIGHLKRFSFRELQIATGNFNSKNILGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPNERLLVYPYMPNGSVADRLRETCHEKPSLDWNRRMRVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDAGNGQVQKGMILDWVRTLFEEKRLEVLVDRDLRGCFDPVELEKAVELSLQCTQSLPTLRPKMSEVLKILEGLVGQSMRPEESQGGANLYDERTCSFSQNYSDVHEEPSFIIEAIELSGPR | 620 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g00694 | 620 | Gene3D | Transferase(Phosphotransferase) domain 1 | 373 | 579 | - | - | |
Pumo2g00694 | 620 | Gene3D | Ribonuclease Inhibitor | 34 | 214 | IPR032675 | - | |
Pumo2g00694 | 620 | Pfam | Protein kinase domain | 298 | 567 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00694 | 620 | SUPERFAMILY | Protein kinase-like (PK-like) | 280 | 570 | IPR011009 | - | |
Pumo2g00694 | 620 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 16 | 568 | - | - | |
Pumo2g00694 | 620 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 34 | 215 | - | - | |
Pumo2g00694 | 620 | Gene3D | Phosphorylase Kinase; domain 1 | 267 | 372 | - | - | |
Pumo2g00694 | 620 | SMART | serkin_6 | 297 | 568 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00694 | 620 | ProSiteProfiles | Protein kinase domain profile. | 297 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00694 | 620 | Pfam | Leucine rich repeat N-terminal domain | 35 | 74 | IPR013210 | - | |
Pumo2g00694 | 620 | ProSitePatterns | Protein kinases ATP-binding region signature. | 303 | 325 | IPR017441 | GO:0005524 | |
Pumo2g00694 | 620 | ProSiteProfiles | Leucine-rich repeat profile. | 126 | 149 | IPR001611 | GO:0005515 | |
Pumo2g00694 | 620 | FunFam | Somatic embryogenesis receptor kinase 1 | 267 | 372 | - | - | |
Pumo2g00694 | 620 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 373 | 588 | - | - | |
Pumo2g00694 | 620 | SUPERFAMILY | L domain-like | 36 | 206 | - | - | |
Pumo2g00694 | 620 | SMART | LRR_typ_2 | 172 | 195 | IPR003591 | - | |
Pumo2g00694 | 620 | SMART | LRR_typ_2 | 100 | 123 | IPR003591 | - | |
Pumo2g00694 | 620 | SMART | LRR_typ_2 | 124 | 148 | IPR003591 | - | |
Pumo2g00694 | 620 | PRINTS | Leucine-rich repeat signature | 127 | 140 | - | - | |
Pumo2g00694 | 620 | PRINTS | Leucine-rich repeat signature | 172 | 185 | - | - | |
Pumo2g00694 | 620 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 419 | 431 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g00694 | Pumo-Chr2 | 11028193 | 11032165 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g00694 | 42 | 620 | Receptor kinase-like Gene Family | AT5G45780 | 72.633 | 0.0 | 837 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Pumo2g00694 | Pkinase | 1.1e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g00694 | - | - | gmx:100810610 | 1190.64 |