Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00694 ATGGAAGATGTCAAAGTTGTTGCTTGGCTCATTTCACTTTTTCTCTGGAATTGGGTGCTTGTTGTTGATAGCACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCTGCTTTGATGTCCATGAAGAGTAAGATGAATGATGAGTTGCATGTCATGGATGGTTGGGATATTAATTCGGTTGACCCTTGTACTTGGAACATGGTTGGTTGCTCTCCAGAGGGTTATGTCACTTCCCTGGAAATGACCAGTGAGGGTTTATCTGGAACGATTTCCTCAGGAATTGGAAATTTGAGCCACCTCCGAACATTGTTATTGCAGAACAATCAGTTATCTGGTCCTATCCCGACTGAGATAGGAAAGTTGTCAGAGCTTCAAACCCTTGACCTTTCTGGTAACCAGCTTGATGGGGAAATTCCTAATTCTTTGGGCTTTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATACATTATCTGGACAGATCCCTCAGCTTGTTGCTAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTAGCAAAAGGTTATAGTATTTCAGGAAACAACTTCCTCTGCACCTCTTCCTCACAAATTTGTATGGGCTTTTCAAAACCAGTAAATGATACAGGGTCATCTCAGACGACTAGTAGTCATCACCAAAGGGTGCTTGCTGTTGTTATTGGCTTTAGTTGCACATTTGTAATTTCGGTGGTGCTTCTTGTCTTTTGGTTGCATTGGTACAGATCACACGTTCTCTACACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGACATTTGAAGAGGTTCTCCTTCCGGGAATTGCAAATTGCTACTGGAAATTTCAATTCAAAAAATATCCTTGGACAAGGTGGTTTTGGTGTTGTCTACAAAGGATGCCTTGCAAACAAAATGTTGGTGGCAGTAAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACAGAAGTTGAGATGATTGGCTTGGCTGTGCATCGGAACCTCTTGCGCCTTTATGGATTTTGTATGACACCAAATGAAAGGTTACTTGTTTATCCTTACATGCCCAATGGCAGCGTTGCCGATCGCTTGAGAGAGACTTGCCATGAAAAGCCATCGTTGGACTGGAACAGGCGAATGCGTGTTGCTCTTGGGGCAGCGCGTGGGCTTCTATATTTGCACGAACAGTGCAATCCAAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGTTGGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACATGTAACTACTGCAGTGCGGGGTACTGTAGGCCACATTGCCCCTGAATACCTCTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGATTTGGCATATTACTCTTGGAGCTCATAACAGGACACAAGGCACTGGATGCTGGAAATGGTCAGGTCCAAAAGGGAATGATCCTTGATTGGGTTAGAACCTTATTTGAGGAGAAGCGGCTGGAAGTGCTAGTTGATAGGGATCTTAGGGGATGTTTTGATCCAGTAGAGTTGGAGAAAGCAGTGGAATTGTCTTTACAGTGCACTCAGTCACTTCCCACTTTGCGGCCGAAGATGTCAGAAGTTTTAAAGATTCTAGAAGGTCTGGTAGGGCAGTCAATGAGGCCAGAGGAGTCACAAGGGGGGGCTAATCTATATGATGAAAGGACTTGCAGTTTCTCACAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA 1863 0.431 MEDVKVVAWLISLFLWNWVLVVDSTDSLLSPKGVNYEVAALMSMKSKMNDELHVMDGWDINSVDPCTWNMVGCSPEGYVTSLEMTSEGLSGTISSGIGNLSHLRTLLLQNNQLSGPIPTEIGKLSELQTLDLSGNQLDGEIPNSLGFLTHLSYLRLSKNTLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGFSKPVNDTGSSQTTSSHHQRVLAVVIGFSCTFVISVVLLVFWLHWYRSHVLYTSYVEQDCEFDIGHLKRFSFRELQIATGNFNSKNILGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPNERLLVYPYMPNGSVADRLRETCHEKPSLDWNRRMRVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDAGNGQVQKGMILDWVRTLFEEKRLEVLVDRDLRGCFDPVELEKAVELSLQCTQSLPTLRPKMSEVLKILEGLVGQSMRPEESQGGANLYDERTCSFSQNYSDVHEEPSFIIEAIELSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00694 620 Gene3D Transferase(Phosphotransferase) domain 1 373 579 - -
Pumo2g00694 620 Gene3D Ribonuclease Inhibitor 34 214 IPR032675 -
Pumo2g00694 620 Pfam Protein kinase domain 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00694 620 SUPERFAMILY Protein kinase-like (PK-like) 280 570 IPR011009 -
Pumo2g00694 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 568 - -
Pumo2g00694 620 FunFam Putative LRR receptor-like serine/threonine-protein kinase 34 215 - -
Pumo2g00694 620 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
Pumo2g00694 620 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00694 620 ProSiteProfiles Protein kinase domain profile. 297 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00694 620 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Pumo2g00694 620 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pumo2g00694 620 ProSiteProfiles Leucine-rich repeat profile. 126 149 IPR001611 GO:0005515
Pumo2g00694 620 FunFam Somatic embryogenesis receptor kinase 1 267 372 - -
Pumo2g00694 620 FunFam Somatic embryogenesis receptor-like kinase 1 373 588 - -
Pumo2g00694 620 SUPERFAMILY L domain-like 36 206 - -
Pumo2g00694 620 SMART LRR_typ_2 172 195 IPR003591 -
Pumo2g00694 620 SMART LRR_typ_2 100 123 IPR003591 -
Pumo2g00694 620 SMART LRR_typ_2 124 148 IPR003591 -
Pumo2g00694 620 PRINTS Leucine-rich repeat signature 127 140 - -
Pumo2g00694 620 PRINTS Leucine-rich repeat signature 172 185 - -
Pumo2g00694 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00694 Pumo-Chr2 11028193 11032165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00694 42 620 Receptor kinase-like Gene Family AT5G45780 72.633 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pumo2g00694 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00694 - - gmx:100810610 1190.64