Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00687 ATGAGGAGTACTTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCGGCAGTGAATATTCTTCTCAAGAAAGTCCTTGAAGAGGGAATGAACCATTTGGTTTTTATCACATACCGGTTGTCAATTGCTACCATTTTCATAGCCCCAATTGTCTACTTTAAGGAAAGAAACGACAGACCAAGGCTCACATTTCGAATTTTATGTTACCTCTTCTGCAGTGCCATTGTTGGGGCATCAGTGACTCAATACTTCTTCCTTCTGGGGATCCAATATACTTCTGCTACCTTTTCTTGTGCTTTCATCAACATGGTGCCTGTGGTCACATTCATGATGGCATTACCATTTGGATTAGAGACTGTGAAAATCAAATGCAACAGTGGGAGAGCTAAGATTCTTGGTTCATTGGTGTGCATAGGTGGCGCATTGATGTTGACACTTTACAAAGGCAAGCCACTCTTTAATTTTTCTCACTATGAATCTGTAGCTCCTGTGGCCAAGAGTTCTGCAGTGAATCTAGCTTCTACAAGGACAACGGAGAGATGGACTATTGGTATAATAGCGTTGGTTTTGGGAACTATCTTTTGGTCTTCTTGGTTTATTTTACAATCGAAAATAAGCAAGAGTTATCCATGCCAGTATTCTAGCACAGCCATCATGTCCTTCTTTGGAGTCATTCAATCAGCTGTTATTTGCTTCTTCACTGACCACAACTTGTCTATTTGGGTTCTCAAGGGAAATATACAAATCATTGCTATTCTATATGCTGGGATGATCGGTTCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTGAAGAAGAGAGGTCCTGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCAATGATTGATATCCCTGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGATGGGATCCATCTTGGTGATTATTGGATTGTACATTCTTCTATGGGGTAAGAGCATGGAAATGCAGAATCGTGTGGTCAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGCCACAACCGCAAATACAACAGTTGACAGTGTATGTTCATGCAGAACCGTGTGATTCTCAGTGCCACTGA 1125 0.4124 MRSTCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPIVYFKERNDRPRLTFRILCYLFCSAIVGASVTQYFFLLGIQYTSATFSCAFINMVPVVTFMMALPFGLETVKIKCNSGRAKILGSLVCIGGALMLTLYKGKPLFNFSHYESVAPVAKSSAVNLASTRTTERWTIGIIALVLGTIFWSSWFILQSKISKSYPCQYSSTAIMSFFGVIQSAVICFFTDHNLSIWVLKGNIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSILVIIGLYILLWGKSMEMQNRVVKLVQEAEETKEQEPQPQIQQLTVYVHAEPCDSQCH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00687 374 Coils Coil 331 351 - -
Pumo2g00687 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 331 - -
Pumo2g00687 374 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016020|GO:0022857
Pumo2g00687 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Pumo2g00687 374 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020
Pumo2g00687 374 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00687 Pumo-Chr2 10947803 10951863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00687 8 261 Nodulin-like Gene Family AT3G30340 50.000 5.34e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00687 - - gmx:100803670 724.161