Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00656 ATGATGAAGCGGGGAGGAAGAAAACCTTCTTCAGCTTCTTCTTCTTCTGGCTCTTCTTTCATTTCTCATGCATCTCCTTTCTCTTGGTTGTCCAAGTTCAAGCACATGAGAATCAATTCAGAGCCAAGTGCTGGAAAAATGAAGCACAAGGCAAAGCAGAGTGGTTCACCACCACAGTATTCTTACAACCATTTAATGAAGAGAGTTACTGAGGATAAGAAGAATAAAGATATTGATGAGAATGTCATTTCCTCCTCAAGTTGCCTTGGTGGTAGAAGGGATACTAAGAAACATGGAAAAAGAGAAGGCACAACCAAGTTAAAGGAGAAGGATAATATTGGTCTTGGAGAAGAAAGGAAGTTGCTGAATGATGGGAAGGTTTCAAAGGAGATGGATGAGTACAATAGAGAAAAGGAGTATGAAAACTTAAGGAGGAGATTTGAGAGGAAAGCACAAAAAGCTTTTCAAGAGCAACTCTCGACATTTGGAAGAGAAGTAGAGGAAGTTGAGTTTGGATCCAGTAAAGCAGTGGAAAAAGATGTGTTGCAATCTGAATCACCTAGAACAATTTGCACCCCAAGAACACATGCTTTTTCCTCTTCAGCAGTTTCAAAGAATTCTATCCTTGGAAATATTGTAGAAGAGATTGAGAAAACTGAGAGGTCATCTCACAAGAAAATGAGTTCTGAGAGGCAGAACTTGAAACAAACTGAGGAGGAGTTGAAGGTGAAGACTAACAGGCAGAAGCAACCACATCATCCCAGCAGAGAACTTCAGAGGAGGAAACCGAAGCCAAGCTCTAGGATCAAAATACATTCTCCAAGGATGGTTTCCAAGGTTGAAATCTGCAAAATAAAGGCTCTAGAAGACATGAAGAAAGCAAAACAAAAGATGAAGAAAGAAAGGGAGGAAATTGTGGAGGAAACACCAGGATTAGAGAGCTTTGCTGTGATTAAGTCTTCATTAGATCCAAAGCAAGATTTCAGAGATTCAATGATCGAGATGATCACGGAGAATCAGATTAGCAAGCCAGAGGAATTGGAAGATCTGTTGGCATGTTATCTGACTTTGAATGCAGATGAGTATCATGATCTCATCATCAAAGTGTTCCGGCAGATATGGTCTGATATGAGCCAAGATCAAGACTCCACAAATCACCAGAAAGGGCAACCCTGGATTGTTCTCAATCACCCTAGAGATATCCAGCATCTCCAACAAGACAATCACGACAAAGATGACAGTCTTCATCCATCAAAATCCCCAAGACACCACAGAGGTTTCCTCTCCAATCTACTAAGATTTATAGTTAAGGTTTCTCAAAGGCTTGTAAGAACAAGTTGA 1341 0.4042 MMKRGGRKPSSASSSSGSSFISHASPFSWLSKFKHMRINSEPSAGKMKHKAKQSGSPPQYSYNHLMKRVTEDKKNKDIDENVISSSSCLGGRRDTKKHGKREGTTKLKEKDNIGLGEERKLLNDGKVSKEMDEYNREKEYENLRRRFERKAQKAFQEQLSTFGREVEEVEFGSSKAVEKDVLQSESPRTICTPRTHAFSSSAVSKNSILGNIVEEIEKTERSSHKKMSSERQNLKQTEEELKVKTNRQKQPHHPSRELQRRKPKPSSRIKIHSPRMVSKVEICKIKALEDMKKAKQKMKKEREEIVEETPGLESFAVIKSSLDPKQDFRDSMIEMITENQISKPEELEDLLACYLTLNADEYHDLIIKVFRQIWSDMSQDQDSTNHQKGQPWIVLNHPRDIQHLQQDNHDKDDSLHPSKSPRHHRGFLSNLLRFIVKVSQRLVRTS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00656 446 Coils Coil 137 157 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 40 112 - -
Pumo2g00656 446 Coils Coil 284 308 - -
Pumo2g00656 446 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 156 379 IPR038933 GO:0045892
Pumo2g00656 446 Pfam Transcriptional repressor, ovate 321 377 IPR006458 -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 214 253 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 66 80 - -
Pumo2g00656 446 Coils Coil 224 247 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 8 23 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 91 112 - -
Pumo2g00656 446 NCBIfam uncharacterized plant-specific domain TIGR01568 316 377 IPR006458 -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 254 269 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 214 271 - -
Pumo2g00656 446 MobiDBLite consensus disorder prediction 1 23 - -
Pumo2g00656 446 ProSiteProfiles OVATE domain profile. 317 376 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00656 Pumo-Chr2 10252010 10255007 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo2g00656 Ovate 4.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00656 - - gmx:102666239 578.941