Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00646 ATGTCTGTGGTGGCCGATAATTCTGCAAACAATGGAAGCCACCAGGTGGTTTTAAATGTAAACGGTGATGCACCCAAGAAGTGTGATGACTCAGCCAACCAAGATTGTGTACCTCTTCTGCAGAAGTTGGTAGCAGAGGTGGTGGGGACGTACTTCTTGATATTTGCAGGGTGTGCTTCGGTGGTGGTGAACCTTGACAAGGACAAGGTGATCACACAACCTGGGATTTCAATTGTTTGGGGCCTCACTGTTATGGTTTTGGTTTACTCTGTTGGTCACATCTCTGGTGCTCATTTCAACCCTGCTGTCACCATTGCTCATGCTACCACCAAAAGGTTTCCACTGAAGCAGGTACCAGCATATGTGATAGCTCAGGTCGTTGGAGCCACACTTGCTAGCGGAACTCTCAGGCTTATATTCAATGGCAAGAATGATCATTTTGCAGGAACACTCCCAGCCGGTTCTGACTTGCAATCTTTTGTGGTCGAATTCATAATCACCTTTTATCTTATGTTCGTCATTTCTGGCGTTGCCACCGATAACAGAGCGATTGGAGAGTTGGCAGGGCTTGCAGTGGGGTCTACGGTACTGCTAAATGTGATGTTTGCCGGGCCAATAACAGGAGCATCAATGAATCCAGCAAGAAGCTTAGGGCCTGCTATTGTGCACCATGAGTACAGAGGAATATGGATATATTTGGTGTCACCAACTCTTGGAGCTGTGGCTGGTACATGGGCCTATAATTTCATAAGGTACACAAACAAGCCAGTGCGTGAGATCACCAAGAGTGCCTCTTTCCTCAAAGGTGGTGAAGCTGAGTGA 822 0.472 MSVVADNSANNGSHQVVLNVNGDAPKKCDDSANQDCVPLLQKLVAEVVGTYFLIFAGCASVVVNLDKDKVITQPGISIVWGLTVMVLVYSVGHISGAHFNPAVTIAHATTKRFPLKQVPAYVIAQVVGATLASGTLRLIFNGKNDHFAGTLPAGSDLQSFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHHEYRGIWIYLVSPTLGAVAGTWAYNFIRYTNKPVREITKSASFLKGGEAE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00646 273 PANTHER AQUAPORIN NIP2-1 24 267 IPR034294 -
Pumo2g00646 273 Pfam Major intrinsic protein 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 CDD MIP 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 SUPERFAMILY Aquaporin-like 37 261 IPR023271 -
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 NCBIfam MIP family channel protein 45 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo2g00646 273 Gene3D Glycerol uptake facilitator protein. 5 263 IPR023271 -
Pumo2g00646 273 ProSitePatterns MIP family signature. 98 106 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00646 Pumo-Chr2 10146676 10149300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00646 28 268 Major Intrinsic Protein MIP AT5G37820 59.600 1.80e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00646 K09874 - gmx:100812577 538.495