Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00638 ATGCTCGTTGGGCAAATTCCAGCAGTTATAAGTGCAAGGCGTCTAAGATATATCTACCTAACAGGTAATATGCTTAGTGGCAATATACCAAAGTCAATCCTGAAGGACGGAAGTAGCATTGATCTTTCATACAACAACTTTACTTGGCAAGATGATGAGCAGCCTGCTTGTCAGGACGGCATGAACTTGAATCTGAATTTGTTCAGAAGCTCGATTAAGGAGAATAAGTTAGAGGAGTATGTTCCTTGCTCCAAGAATTTCAGCTGTCCACGGTATTCAAGTTGTTTACATGTTAACTGTGGCGGGAAGGATGTAAATGTAAAAGATGATAAAGGAGAAAACCTTTATGTGGGAGATGATGTTGAGGGTGGCACTGCAACTTATTTCTACAGTTCCAATGATCACTGGGGATTTAGTAGCACTGGAGACTTCATGGATGATTTTGATAGCCAGAACATACGTTACACAGTATCACTTTCATCTTCAAATATGCCTGAATTATACAAAACAGCACGTGTATCTCCAATTACACTTACTTATTTCCATAATTGCATGGAAAATGGGAACTATATTGTAAACCTCCACTTTGCTGAGATACTGTTTACAAATGATAAAACATTTGGAAGTCTTGGAAAGCGCATATTTGATATCTATGTTCAGGGAAAACTGATTCGCAAAAATTTTGATATAGAGAATCAGACAAATGTTGCTGAAAAACCACTGGTACTGCCTATATACAATATCAGCATTACAAATAATGTCTTGGAGATTCGGTTCTACTGGGCTGGAAAAGGAACAACTAGAATTCCTGATGCTGGAGTTTATGGTCCCCTTGTATCAGCTTTTTCTGTGGTTTCAAATTCTAGAGTTTGCTCAAATGGAGAAAAGAAAGTTGCTGTTTCTATAATCATTGCAATTGTAGCTGGTGCTCTATGCTTAGTGCTATTTATATCTGGATTCATTTGGTGGAAGTGGAAAGGCTTTTTTAGAGGGAAACTGCAAAGTGAAGGTACAAAAGATAGCGATACTCAGGCAGGCAATTTTAGCTTGGAGCAGATCAGAGTTGCCACTAATGACTTCTCTTCTGCTAATAAGATTGGAGAAGGCGGTTTTGGTCCTGTATACAAGGGTCAATTGCTAGATGGTACTTTTATAGCGGTCAAGCAACTGTCATCAAAATCACAGCAGGGAAATCGTGAATTTATAAATGAAATAGGCTTGATATCTTGTGTGCAACACCCTAACCTTGTAAAGCTTCATGGATACTGTGCTGAAGGGGAACAACTTTTGCTGGTATATGAGTACTTGGAAAATAACAGCCTTGCCCGAGCTTTATTTGGTAATGAAAACAATCAGCTTAAATTGGACTGGCCGACAAGGTTTAGGATTTGCATTGGCATAGCAAAAGGTTTAGCATTTCTCCATGATGAGTCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGCAAATTGATTCCAAAGATATCTGACTTTGGCTTGGCTAAGCTTGATGAAGCGGAGAAGACCCATATCAGCACCCGAGTAGCTGGGACTATAGGATATATGGCACCAGAATATGCATTATGGGGCTACCTTACAGACAAGGCTGATGTTTACAGTTTTGGAGTTGTGGCATTAGAAATTGTTAGTGGGAAAAGCAATAACAATTATTTACCAGACGATGGTAGTGTTTGTCTTTTGGATTGGGTATGCTTAAAGCTCCTAGCTGTATTTTTCAATTATAAACCCTTCATTATTTTTCTATTACTTATTTAA 1797 0.384 MLVGQIPAVISARRLRYIYLTGNMLSGNIPKSILKDGSSIDLSYNNFTWQDDEQPACQDGMNLNLNLFRSSIKENKLEEYVPCSKNFSCPRYSSCLHVNCGGKDVNVKDDKGENLYVGDDVEGGTATYFYSSNDHWGFSSTGDFMDDFDSQNIRYTVSLSSSNMPELYKTARVSPITLTYFHNCMENGNYIVNLHFAEILFTNDKTFGSLGKRIFDIYVQGKLIRKNFDIENQTNVAEKPLVLPIYNISITNNVLEIRFYWAGKGTTRIPDAGVYGPLVSAFSVVSNSRVCSNGEKKVAVSIIIAIVAGALCLVLFISGFIWWKWKGFFRGKLQSEGTKDSDTQAGNFSLEQIRVATNDFSSANKIGEGGFGPVYKGQLLDGTFIAVKQLSSKSQQGNREFINEIGLISCVQHPNLVKLHGYCAEGEQLLLVYEYLENNSLARALFGNENNQLKLDWPTRFRICIGIAKGLAFLHDESRFKIVHRDIKASNVLLDGKLIPKISDFGLAKLDEAEKTHISTRVAGTIGYMAPEYALWGYLTDKADVYSFGVVALEIVSGKSNNNYLPDDGSVCLLDWVCLKLLAVFFNYKPFIIFLLLI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00638 598 Gene3D Ribonuclease Inhibitor 1 53 IPR032675 -
Pumo2g00638 598 Pfam Malectin domain 95 282 IPR021720 -
Pumo2g00638 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Pumo2g00638 598 FunFam Os07g0541700 protein 436 525 - -
Pumo2g00638 598 ProSiteProfiles Protein kinase domain profile. 360 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00638 598 Gene3D Transferase(Phosphotransferase) domain 1 436 584 - -
Pumo2g00638 598 Gene3D Phosphorylase Kinase; domain 1 330 435 - -
Pumo2g00638 598 Pfam Protein tyrosine and serine/threonine kinase 363 560 IPR001245 GO:0004672|GO:0006468
Pumo2g00638 598 SMART serkin_6 360 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00638 598 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 330 435 - -
Pumo2g00638 598 Gene3D - 93 289 - -
Pumo2g00638 598 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 578 - -
Pumo2g00638 598 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 93 287 - -
Pumo2g00638 598 SUPERFAMILY Protein kinase-like (PK-like) 344 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00638 Pumo-Chr2 10090603 10096924 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00638 2 526 Receptor kinase-like Gene Family AT1G29750 58.175 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo2g00638 PK_Tyr_Ser-Thr 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00638 - - qsu:111995633 838.18