Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00633 ATGGCAACCAGAAGAGTCAAAGCCATAGGCATTGACTTGGGCACAACCTACAGCTGCGTGGGAGTGTGGCAACACAACCGCGTTGAGGTCATTCCCAACGACCAAGGCAACCGCACCACCCCTTCCTACGTTGCCTTCACCGACACTCAAAGGTTGTTGGGCGACTCTGCCATGAACCAGCGATCCATGAATCCACAAAACACCGTCTTCGACGCCAAACGTTTGATCGGTCGCCGATTCTCTGATCAATTGGTGCAGCAAGACGTGAAGCTCTGGCCCTTTAAGGTTGTCCCTGGAACCAGAGACAAGCCCATGATTGCTGTCACATACAAAGACGAGGAGAAACTCCTTGCAGCCGAAGAGATATCTTCCATGGTGCTGTTTAAGATGAAGGAGGTTGCTGAAGCCTACTTGGGTTATGCAGTGAAGGATGCGGTGATCACTGTCCCTGCTTACTTCAGCAACGCCCAGAGACAAGCCACCAAGGATGCTGGGAAAATCGCGGGTTTGAACGTGTTGAGGATCATCAACGAGCCAACCGCAGCTGCCATTGCTTACGGGTTGGACAAGAAAGGGTGGAGAGAAGGCGAGCAGAACGTGCTTGTCTTTGACCTTGGTGGTGGTACTTTTGATGTTTCCTTGGTCACAATTGATGAAGGAATGTTCAAGGTTAAGGCCACCGTGGGAGATACTCATTTGGGTGGTGTTGACTTTGATAACAAATTGGTTGACTATCTCGTGGGTATTTTCAACAGGAGGTACAAGAAGGACATTAGTGAAAACCCCAAAGCTCTTGGAAGGTTGAGATCAGCGTGCGAGAAAGCTAAGAGGATACTCTCTTCAAGTTCTCAAACCACTATTGAGCTTGATTCTTTATGCGGAGGGGTTGACCTACATGCCATTGTTACAAGGGCCTTGTTCGAGGAATTGAATAAGGACTTGTTTATGAAGTGTATGGAGACGGTGGAGAAGTGTCTCGTTGAGGCAAGGATTGCTAGAAGTCAAGTTCATGAGTTTGTTCTTGTTGGTGGGTCTACTAGAATTCCAAAAGTGCAGCGACTTTTGAAGGACATGTTCAGCTTGAATGGTAACAAAGAGCTTTGCAAAAGCATCAACCCTGATGAGGCTGTGGCGTATGGTGCCGCGGTTCAGGCCGCGATTTTGAGTGGCGAAGGAGACAAGAAGGTGGAGGAGCTGTTGTTGCTGGATGTGATGCCGCTTAGTCTTGGAATTGAGACTGATGGTGGTGAAATGTCAGTTTTGATTCCCAAGAACACCATGATCCCCACCAAGAAGGAGAGCGTTTTCTCCACGTTTTCTGATAATCAAAGAAGTGTTTTGATCAAGGTGTTCGAGGGGGAGCAAGCGAAGACTGAGGATAACTTCCTTCTTGGGAAGTTTGAGCTATCTGGGTTCACACCTTCGCCAAGGGGAGTTCCACAAATCAATGTTGGGTTTGATGTGGATGTTGATGGCATTGTGGAGGTCACTGCTGGAGATAGGAGTACGGGGCTGAAGAAGAAGATCACAATCAGCAACAAGCATGGGAGGTTGAGTCCTGAAGAGATGAGGAGAATGGTGAGAGATGCAGAGAGGTATAAGGCAGAGGATGAGGAGGTGAGGAACAAGGTGAGGGCCAAGAACTTGCTTGAGAATTATGTTTTTGAAATGAGGGACAGAGTAAAGAACCTTGAGAAGTTAGTGGAGGAGACCATAGAGTGGCTTGACAGAAACCAATTGGCTGAAACTGATGAGTTTGAGTACAAGAAGCAGGAATTGGAAGAAAAGGTTCTGAAGTTCATGTAA 1806 0.4773 MATRRVKAIGIDLGTTYSCVGVWQHNRVEVIPNDQGNRTTPSYVAFTDTQRLLGDSAMNQRSMNPQNTVFDAKRLIGRRFSDQLVQQDVKLWPFKVVPGTRDKPMIAVTYKDEEKLLAAEEISSMVLFKMKEVAEAYLGYAVKDAVITVPAYFSNAQRQATKDAGKIAGLNVLRIINEPTAAAIAYGLDKKGWREGEQNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNKLVDYLVGIFNRRYKKDISENPKALGRLRSACEKAKRILSSSSQTTIELDSLCGGVDLHAIVTRALFEELNKDLFMKCMETVEKCLVEARIARSQVHEFVLVGGSTRIPKVQRLLKDMFSLNGNKELCKSINPDEAVAYGAAVQAAILSGEGDKKVEELLLLDVMPLSLGIETDGGEMSVLIPKNTMIPTKKESVFSTFSDNQRSVLIKVFEGEQAKTEDNFLLGKFELSGFTPSPRGVPQINVGFDVDVDGIVEVTAGDRSTGLKKKITISNKHGRLSPEEMRRMVRDAERYKAEDEEVRNKVRAKNLLENYVFEMRDRVKNLEKLVEETIEWLDRNQLAETDEFEYKKQELEEKVLKFM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00633 601 Coils Coil 523 543 - -
Pumo2g00633 601 Pfam Hsp70 protein 8 600 IPR013126 GO:0005524|GO:0140662
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 208 218 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 7 20 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 398 417 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 371 391 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 35 47 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 479 495 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 145 165 - -
Pumo2g00633 601 PRINTS 70kDa heat shock protein signature 57 65 - -
Pumo2g00633 601 FunFam Heat shock protein 70 9 198 - -
Pumo2g00633 601 Gene3D - 547 601 IPR029048 -
Pumo2g00633 601 Gene3D - 9 386 - -
Pumo2g00633 601 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 395 551 IPR029047 -
Pumo2g00633 601 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Pumo2g00633 601 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Pumo2g00633 601 Gene3D - 191 368 - -
Pumo2g00633 601 FunFam heat shock 70 kDa protein-like 70 125 - -
Pumo2g00633 601 PANTHER HEAT SHOCK PROTEIN 70KDA 8 573 IPR013126 GO:0005524|GO:0140662
Pumo2g00633 601 FunFam Heat shock 70 kDa 234 317 - -
Pumo2g00633 601 Gene3D Actin; Chain A, domain 4 234 317 - -
Pumo2g00633 601 FunFam Heat shock 70 kDa 393 547 - -
Pumo2g00633 601 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 546 IPR029047 -
Pumo2g00633 601 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 597 IPR029048 -
Pumo2g00633 601 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Pumo2g00633 601 Gene3D - 70 125 - -
Pumo2g00633 601 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00633 Pumo-Chr2 10065900 10068286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00633 1 594 Calmodulin-binding Proteins AT1G16030 68.092 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00633 K03283 - gmx:100788531 1105.89