Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00628 ATGGAATCGAAAAACCCTGCGAGGCTTACGCTGGGAAAGCAGTCATCGCTGGCCCCAGAACGCCATAACGAAGAAGCAGAGCTCCAAAACGATGGAGACGCTGTTGATCAGGGTGTGAGGTTGATGTATTCGGCATTCGAAGGCGATGTGGATGGAATTCGCGAGGTGTTGGAGGCTGGTGTGAGTGTGAATTACAAGGATATTGTTGATCGCACTGCTCTTCATGTTGCGGCGTGTGAGGGCTTCACCGAAGTTGTTGATTTGTTGCTCCAAAAAGGTGCTGAAGTTGACCCCAAGGATCGATGGGGGAGCACGCCACTTGCAGATGCTATTTTTTATAAAAAAAATGACGTGATCAAACTATTGGTGAAGCATGGAGCAAAGCCTCTGATGACCCCTATGTTTGTTAATCATGCACGGGAAGTCCCAGAGTATGAAATCAATCCTAAAGAGCTTGATTTTACCAACAGTGTGGAGATAACAAAGGGGACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCGGTAAAAAAGCTTGGGGAGGATGTAATTAGTGATGACGAGAAAGTGAAGGCTTTCAGAGATGAGCTTTCTCTGTTCCAGAAGATCCAGCATCCAAATGTCGTCCAATTTCTGGGTGCTGTGACCCAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCATGAAAAGAAAAGGAGCTTTGAAACCATCAACAGCTGTGAGATTTGCACTTGACATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCTGGGCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTGGCAGTTAAAGAACACAAGCCTCTAACTTGCCAAGATACTTCCTGCCGCTATGTGGCTCCTGAAGTTTTCAGACAAGAAGAATATGACACTAAAGTGGATGTGTTTTCATTTGCACTAATTCTGCAAGAGATGATTGAAGGCTGCCCTCCTTTTTCTGCAAAGCAAGACGATGAAGTTCCTAAGGTATATGCTGCAAAAGAGCGTCCGCCTTTCCGAGCTCCAGCCAAGCGTTACTCCCATGGAATTCGAGAATTGATCCAAGAGTGCTGGAATGAGAATCCAGCTAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTGGAGTCCATGTACAACACAATTGGTCATAAAAGACATTGGAAGGTTATCATCTCTCTTACATTCCCCCCTCCCCTGCACCAGATATTTGTGCTTGCATATATGCTTGTTCAAAACTTTGTGGAGTGGACTGAATGCTTAGACTCTGTTTATGAATATTTAATATTTTACTGA 1392 0.444 MESKNPARLTLGKQSSLAPERHNEEAELQNDGDAVDQGVRLMYSAFEGDVDGIREVLEAGVSVNYKDIVDRTALHVAACEGFTEVVDLLLQKGAEVDPKDRWGSTPLADAIFYKKNDVIKLLVKHGAKPLMTPMFVNHAREVPEYEINPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGEDVISDDEKVKAFRDELSLFQKIQHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFMKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEHKPLTCQDTSCRYVAPEVFRQEEYDTKVDVFSFALILQEMIEGCPPFSAKQDDEVPKVYAAKERPPFRAPAKRYSHGIRELIQECWNENPAKRPTFRQIITRLESMYNTIGHKRHWKVIISLTFPPPLHQIFVLAYMLVQNFVEWTECLDSVYEYLIFY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00628 463 FunFam Os01g0748600 protein 140 426 - -
Pumo2g00628 463 SUPERFAMILY Ankyrin repeat 40 131 IPR036770 -
Pumo2g00628 463 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Pumo2g00628 463 Pfam Protein tyrosine and serine/threonine kinase 170 407 IPR001245 GO:0004672|GO:0006468
Pumo2g00628 463 Gene3D - 5 140 IPR036770 -
Pumo2g00628 463 Pfam Ankyrin repeats (3 copies) 41 130 IPR002110 GO:0005515
Pumo2g00628 463 FunFam Integrin-linked protein kinase family 19 145 - -
Pumo2g00628 463 MobiDBLite consensus disorder prediction 1 31 - -
Pumo2g00628 463 Gene3D Transferase(Phosphotransferase) domain 1 141 424 - -
Pumo2g00628 463 SUPERFAMILY Protein kinase-like (PK-like) 154 408 IPR011009 -
Pumo2g00628 463 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Pumo2g00628 463 CDD STKc_MAP3K-like 160 407 - -
Pumo2g00628 463 PRINTS Tyrosine kinase catalytic domain signature 226 239 IPR001245 GO:0004672|GO:0006468
Pumo2g00628 463 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Pumo2g00628 463 PRINTS Tyrosine kinase catalytic domain signature 265 283 IPR001245 GO:0004672|GO:0006468
Pumo2g00628 463 SMART ANK_2a 36 65 IPR002110 GO:0005515
Pumo2g00628 463 SMART ANK_2a 69 98 IPR002110 GO:0005515
Pumo2g00628 463 SMART ANK_2a 102 131 IPR002110 GO:0005515
Pumo2g00628 463 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 410 - -
Pumo2g00628 463 PIRSF ILK 1 428 - -
Pumo2g00628 463 ProSiteProfiles Protein kinase domain profile. 154 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00628 463 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00628 Pumo-Chr2 9917550 9926197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00628 8 428 MAP Kinase Kinase Kinase AT4G18950 67.606 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pumo2g00628 PK_Tyr_Ser-Thr 9.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00628 - - gmx:100790126 816.994