Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00615 ATGGTTGTGGAAGATACCCAAAAATCAACCATCACCGATGACCAAAACGCAAACCCTAGCAGGGTCGCCAACGACAACGACGACGACGATCTCGAAGAGGGGGAGATCCTCGACGACGGCGACGACGGCGCCTCCGCCACATCGAAGCCTCCGGCCGCCCTCGTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAACCCTTCCGCCAAGTCCAAACAAGTCGCATGGGGCAGCTCCATCCGACCCATCTACACTTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAATTTGGGTGTTGGGGCGGACTTTCACTGCTTCAAGTATAAGATTGAGCCCAAGTGGGAGGACCCTATCTGCGCTAATGGAGGCAAGTGGACTATGATTTTCCAAAGGGGAAAATCTGATACCAGTTGGTTGTATACGTTGTTGGCTATGATTGGAGAACAGTTTGATCACGGAGATGAAATATGCGGAGCTGTTGTGAATGTCAGAAATAAGCAGGAAAAAATTGCTCTTTGGACTAAGAACGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAACGACACAATTGGCTTTATATTTCATGACGATGCAAAGAAGCTTGACAGAGCTGCAAAAAACAAATACGTCGTATGA 705 0.4922 MVVEDTQKSTITDDQNANPSRVANDNDDDDLEEGEILDDGDDGASATSKPPAALVRNPHPLENSWTFWFDNPSAKSKQVAWGSSIRPIYTFATVEEFWSIYNNIHHPSNLGVGADFHCFKYKIEPKWEDPICANGGKWTMIFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNKQEKIALWTKNASNEAAQVSIGKQWKEFLDYNDTIGFIFHDDAKKLDRAAKNKYVV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00615 234 MobiDBLite consensus disorder prediction 1 22 - -
Pumo2g00615 234 FunFam Eukaryotic translation initiation factor 4E 51 234 - -
Pumo2g00615 234 SUPERFAMILY eIF4e-like 55 229 IPR023398 -
Pumo2g00615 234 Gene3D RNA Cap, Translation Initiation Factor Eif4e 52 234 IPR023398 -
Pumo2g00615 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 20 222 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pumo2g00615 234 Pfam Eukaryotic initiation factor 4E 60 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pumo2g00615 234 MobiDBLite consensus disorder prediction 1 57 - -
Pumo2g00615 234 MobiDBLite consensus disorder prediction 26 40 - -
Pumo2g00615 234 ProSitePatterns Eukaryotic initiation factor 4E signature. 115 138 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00615 Pumo-Chr2 9643670 9646055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00615 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 64.876 2.47e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00615 K03259 - gmx:100793288 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00615 2 9643670 9646055 Pumo2g00615 2 9643670 9646055 ECH