Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00588 ATGGAGAGTGGTGGTGGACGCGATTCTGGTATGAGTTCAGAGACTGTGAATTCCTCCACTATGAGCAACGAAAGCGTTTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCCCCCTTCCTCCTCCTCCCCTGAGAGCCTCTTTGTCAAGCCCCACCGCTCCTCCGACTTCGCCTACTCCGCCATCCTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGATATCGGCACCGTCTACCTCTGCCGCCTCCGCCACGACGACGACGACGACGACCCCGGCGCGTGCTTCTACGCCATGAAGGTGGTGGACAAGGAGGCCGTGGCGCTCAAGAAGAAGGCGCAGAGAGCGGAAATGGAGAGAAAGATCCTGAAGATGGTGGACCATCCCTTCCTCCCTACTCTCTACGCGGAGTTCGAGGCCTCCCATTTCTCTTGCATTGTGATGGAGTATTGCTCCGGTGGGGACTTGCACTCGCTTCGACACAACCACCCCAACAAGCGATTCTCTCTCTCCTCTGCCAGGTTTTACGCGGCTGAAGTACTGGTTGCGTTGGAGTATCTCCACATGCTGGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTATGCTCCCATGCAATCCCAGCCGTCGAATCCCCTGACTGTTCCGCATTCGCACCCGCGTTACGCTACACTCGCCAGTACTCCACCCCCTTCTCGTGCCTCTCGAACCGCGTGTTCCGCTCCAGGAAGGTCCAGACCCTCCAGCCGAACCGTCTCTTCGTGGCCGAACCGGTCGGGGCCCGCTCGTGCTCCTTCGTTGGGACTCACGAGTACGTGTCGCCGGAAGTGGCTTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTCGGAATATTCATCTACGAGATGGTGTACGGTCGAACACCCTTCGCGGGCCCATCGAACGAGGCTACGCTGCGCAACATCATAAAAAAGCCCCTCACCTTTCCCACCGCCACGCCCTCCAGCACGCTTGAAATGCACGCGCGGGACCTCATCTCAGGTTTGCTCAACAAGGACCCGAACCGCAGGCTCGGGTCCAAGCGAGGCGCTGCGGACGTCAAAAAACACCCTTTCTTCGCGGGGCTCAATCTCGCGCTCATACGAATGGTCACGCCGCCGGAGGTTCCGTCCCTCAGAAGACACAAAACGACGCCGTTTTACCCCGCTAACGATAACGGCAACTTAAATAACAGTAGACAGCAGCTAACGCCGTTTGATTACTTTTGA 1341 0.5846 MESGGGRDSGMSSETVNSSTMSNESVCSTSFSRLSFDLPPSSSSPESLFVKPHRSSDFAYSAILRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRHDDDDDDPGACFYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHNHPNKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVESPDCSAFAPALRYTRQYSTPFSCLSNRVFRSRKVQTLQPNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLTFPTATPSSTLEMHARDLISGLLNKDPNRRLGSKRGAADVKKHPFFAGLNLALIRMVTPPEVPSLRRHKTTPFYPANDNGNLNNSRQQLTPFDYF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00588 446 ProSiteProfiles Protein kinase domain profile. 75 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00588 446 SMART serkin_6 75 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00588 446 MobiDBLite consensus disorder prediction 417 436 - -
Pumo2g00588 446 MobiDBLite consensus disorder prediction 1 23 - -
Pumo2g00588 446 FunFam protein kinase PINOID 2 73 161 - -
Pumo2g00588 446 CDD STKc_phototropin_like 73 418 - -
Pumo2g00588 446 Pfam Protein kinase domain 75 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00588 446 Pfam Protein kinase domain 292 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00588 446 Gene3D Phosphorylase Kinase; domain 1 73 161 - -
Pumo2g00588 446 FunFam serine/threonine-protein kinase D6PK-like 289 415 - -
Pumo2g00588 446 Gene3D Transferase(Phosphotransferase) domain 1 162 229 - -
Pumo2g00588 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pumo2g00588 446 FunFam protein kinase PINOID 162 230 - -
Pumo2g00588 446 PANTHER FLIPPASE KINASE 1-RELATED 17 416 - -
Pumo2g00588 446 Gene3D Transferase(Phosphotransferase) domain 1 290 415 - -
Pumo2g00588 446 SUPERFAMILY Protein kinase-like (PK-like) 55 420 IPR011009 -
Pumo2g00588 446 Coils Coil 110 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00588 Pumo-Chr2 9382620 9385632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00588 8 446 AGC Kinase Gene Family AT2G34650 68.326 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo2g00588 Pkinase 1.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00588 - - gmx:100795536 784.252