Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00587 ATGGCTTTTGAGCCATTGGATTGGTATTGTCGGCCAGTCGCAAATGGAGTATGGACAAAATCAGTGGAGAATGCCTTTGGTGCTTACACTCCGTGTGCGGTTGACTCTCTGGTCATTTCCGTTTCTTATTTGGTACTTCTTGGCCTGTGCATTTACCGCATATGGTTGATTAAGAAGGATTTCACAGTCAAGAGGTTCCGTTTAAGGTCAAACCTTTACAATTATATTCTGGGATTACTAGCCTTATATTGTGTGGCAGAGCCATTATACAGATTGATCATGGGAATATCAGTTCTAAATTTAGACGGGCAGAATCAACTTGCTCCATTTGAGATAATTTCACTGATCATTGAGGCTCTTGCTTGGTGCTCTATACTAATTTTGATTGGGATTGAAACTAAAGTCTACATCCGAGAATTCCGGTGGTTTGTCAGATTTGGTTTGATTTATACTATTGTAGGGGATGCTGTAATGTTCAATCTCATCATTTCTGTGAAGGAATTATATAGCAGCTCTGTACTATATTTATACATCAGTGAGGTGGTTAGCCAGGTTTTGTTTGGAATACTATTGCTTGTGTATGTTCCTACTTTGGATCCTTATCCAGGTTATACCCCCATTGGGACTGAGATGATTACTGATGCTGCATATGATGAACTCCCTGGAGGAGATATGATATGTCCTGAGAGGAGTGCCAACATATTGTCAAAAATAATGTTTTCTTGGATGAATCCCATCATGAAACTAGGATATGAGAGACCACTGACAGAGAAGGATATATGGAAATTAGATACATGGGAACGGACAGAGACACTGATCAATAAGTTCCAGAAATGTTGGGTTGAGGAGTCTCGGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGCAAGATTGGCAATGATATTTCCCAATTTACGGGCCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAAATGGTGATCCATCCTGGACTGGCTATGTTTATGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTTCCGGATAAGATCAACATTGGTGGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCATGAAGCGCGAAAGCAATTTGCAACTGGAAAAATAACTAACTTGATGACTACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCAGTACGAATTGTTGTTGCTATGATTCTTCTTTACCAAGAACTTGGTGTTGCTTCCCTTCTTGGTGCTTTGATGCTAGTTCTTATGTTTCCATTACAGACATTTATCATCAGCAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAAAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAAGTATTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGATTGTCCGAAATGATGAATTATCATGGTTTCGAAAAGCATCATTACTAGGAGCGTGTAATGGATTTATACTAAATAGCATTCCAGTTTTTGTAACTGTGATTACATTTGGAGTATTCACCTTGCTTGGAGGGGATCTGACACCTGCAAGAGCTTTTACATCACTTTCTCTGTTTTCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATACTATAACTCAGGTGGTTAATGCAAATGTATCGTTGAAGCGACTAGAAGATTTACTCTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCTCTTGAGCCAGGGTTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCGAAGGCAGAGAGGGCCACATTGTCAAACATAAATCTGGATATACCTGTAGGTTGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTAGTATCTGCAATGCTTGGAGAACTTCCTTCAATGGCAGATTCATCTATTGTTTTGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCGTGGATTTTTAATGCAACTGTACGGGATAACGTTTTGTTTGGTTCTGTCTTTGACCCAGCAAGATATCAAAGGGCAATAAATGTGACTGAACTGCAGCATGACCTTGAGTTACTGCCTGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGCGGTGGCCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGACCCCCTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGATTTGAGAGGGAAGACCCGAGTTCTTGTCACAAATCAGCTGCATTTTCTTTCACAGGTTGATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCTACCCATGGACCACTGTTTCAAAAGCTTATGGAAAATGCGGGAAAAATGGAGGAGTATGAAGAAGAAAAGGTAGATACTGAAACCACAGATCAGAAGCCCTCTTCAAAACCAGTGGCCAATGGAGCAATTAATGATCATGCAAAGAGTGGAAGTAAACCAAAAGAAGGAAAATCTGTCCTTATTAAACAAGAAGAACGAGAAACAGGGGTTGTCAGCTTGAATGTTCTAATGAGGTACAAGAATGCATTAGGAGGGTTTTGGGTGGTTTTCGTACTCTTCGCATGCTATGTCTCAACTGAAACGTTACGAATATCAAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTTCTACAGAGGGTTACAATCCTGCCTTCTACAATATGGTATATGCAGCTCTATCATTTGGTCAGGTTTTGGTGACTTTAACAAATTCTTTTTGGTTAATCGTATCAAGTCTTTATGCTGCTAGAAGGTTGCACGAAGCCATGCTTAGCTCCATATTACGAGCTCCCATGGTGTTTTTCCAAACAAATCCACTCGGAAGGGTTATCAACAGGTTTGCGAAGGATCTAGGTGACATTGATCGTAATGTTGCTCCATTTGTGAATATGTTTCTAGGTCAAGTGTCCCAGCTTCTTTCAACCTTCATCCTCATAGGCATTGTCAGCACAATGTCCTTGTGGGCAATACTGCCATTGTTGGTGTTGTTTTACGTAGCGTATCTATACTACCAGAGCACCGCTCGCGAAGTGAAGCGCTTAGACTCGATTAGCAGATCTCCTGTTTATGCACAGTTCGGAGAAGCGCTGAATGGCTTATCAACGATTCGTGCTTACAAAGCATACGATCGAATGGCAGATATAAATGGGAAATCCGTGGACAACAGCATCCGATTCACTCTGGTGAACATGAGCGGAAACCGATGGCTCGCAATCCGATTGGAAACGTTGGGAGGCCTCATGATATGGTTGACTGCAACCTTTGCTGTCATGCAGAATGGGAGAGCAGAGAACCAGCAAGAATTTGCATCCACCATGGGGTTACTACTTAGCTATGCTCTGAACATTACTAGTTTGCTTACTGGTGTGCTGAGGCTTGCAAGTTTGGCTGAGAATAGTTTAAATGCAGTTGAACGGATTGGCACTTACATAGATTTGCCCTCGGAGGCTCCCTCTATCATCGATGATAATCGCCCTCCTCCTGGCTGGCCTTCTTCAGGCTCAATCAGATTCGAAGATGTTGTTCTTCGCTACAGACCTGAACTTCCTCCTGTGTTGCATGGCTTGTCTTTCACCATTTTCCCAAGCGATAAGGTTGGCATTGTTGGGAGGACAGGTGCAGGAAAATCCAGCATGCTTAATGCTTTGTTTCGAATTGTAGAATTGGAACGAGGAAGAATATTAATTGATGATTATGATGTTGCAAAGTTTGGGCTTGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCGTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTATCTGAGGCAGGCGAGAACTTCAGTGTTGGACAAAGGCAACTGTTGAGTCTTTCCCGGGCTTATTGCGTAGATCGAAGATACTGGTACTTGACGAAGCAACCGCAGCAGTTGATGTTAGAACAGATGCACTCATACAAAAAACAATTCGAGAGGAATTCAAATCCTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGTGATCGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAGATGGTCCAAAGCACAGGAGCTGCAAATGCCCAATATTTACGCAGCTTAG 4452 0.4221 MAFEPLDWYCRPVANGVWTKSVENAFGAYTPCAVDSLVISVSYLVLLGLCIYRIWLIKKDFTVKRFRLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQNQLAPFEIISLIIEALAWCSILILIGIETKVYIREFRWFVRFGLIYTIVGDAVMFNLIISVKELYSSSVLYLYISEVVSQVLFGILLLVYVPTLDPYPGYTPIGTEMITDAAYDELPGGDMICPERSANILSKIMFSWMNPIMKLGYERPLTEKDIWKLDTWERTETLINKFQKCWVEESRKSKPWLLRALNASLGGRFWWGGFCKIGNDISQFTGPLILNQLLQSMQNGDPSWTGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGFRIRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDAEALQQICQSLHTLWSAPVRIVVAMILLYQELGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTVKYYAWESSFQSKVQIVRNDELSWFRKASLLGACNGFILNSIPVFVTVITFGVFTLLGGDLTPARAFTSLSLFSVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERILLPNPPLEPGLPAISIKNGYFSWDAKAERATLSNINLDIPVGCLVAVVGSTGEGKTSLVSAMLGELPSMADSSIVLRGTVAYVPQVSWIFNATVRDNVLFGSVFDPARYQRAINVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGDLRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSTHGPLFQKLMENAGKMEEYEEEKVDTETTDQKPSSKPVANGAINDHAKSGSKPKEGKSVLIKQEERETGVVSLNVLMRYKNALGGFWVVFVLFACYVSTETLRISSSTWLSHWTDQSSTEGYNPAFYNMVYAALSFGQVLVTLTNSFWLIVSSLYAARRLHEAMLSSILRAPMVFFQTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAILPLLVLFYVAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSVDNSIRFTLVNMSGNRWLAIRLETLGGLMIWLTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDYDVAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRAYCVDRRYWYLTKQPQQLMLEQMHSYKKQFERNSNPVQCSLLLIALTPLLIVIGFFCLMVVRFLNMIPLRSCCQMKVVLSLRWSKAQELQMPNIYAA 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00587 1483 ProSitePatterns ABC transporters family signature. 1374 1388 IPR017871 GO:0005524|GO:0016887
Pumo2g00587 1483 FunFam ABC transporter C family member 2 880 1218 - -
Pumo2g00587 1483 SUPERFAMILY ABC transporter transmembrane region 914 1217 IPR036640 GO:0005524|GO:0016020
Pumo2g00587 1483 Gene3D - 610 864 IPR027417 -
Pumo2g00587 1483 CDD ABC_6TM_ABCC_D2 916 1212 IPR044726 GO:0140359
Pumo2g00587 1483 CDD ABCC_MRP_domain1 615 815 - -
Pumo2g00587 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 917 1200 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g00587 1483 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Pumo2g00587 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1227 1396 IPR027417 -
Pumo2g00587 1483 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Pumo2g00587 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 838 IPR027417 -
Pumo2g00587 1483 Gene3D ABC transporter type 1, transmembrane domain 276 601 IPR036640 GO:0005524|GO:0016020
Pumo2g00587 1483 Gene3D ABC transporter type 1, transmembrane domain 880 1218 IPR036640 GO:0005524|GO:0016020
Pumo2g00587 1483 FunFam Multidrug resistance-associated protein member 4 1221 1397 - -
Pumo2g00587 1483 FunFam ABC transporter C family member 2 609 855 - -
Pumo2g00587 1483 Pfam ABC transporter transmembrane region 306 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g00587 1483 Pfam ABC transporter transmembrane region 917 1159 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g00587 1483 Pfam ABC transporter 1254 1393 IPR003439 GO:0005524
Pumo2g00587 1483 SMART AAA_5 642 820 IPR003593 GO:0016887
Pumo2g00587 1483 SMART AAA_5 1263 1451 IPR003593 GO:0016887
Pumo2g00587 1483 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Pumo2g00587 1483 MobiDBLite consensus disorder prediction 845 885 - -
Pumo2g00587 1483 FunFam ABC transporter C family member 2 279 600 - -
Pumo2g00587 1483 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016020
Pumo2g00587 1483 Gene3D - 1220 1406 IPR027417 -
Pumo2g00587 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1475 IPR003439 GO:0005524
Pumo2g00587 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo2g00587 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Pumo2g00587 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00587 Pumo-Chr2 9340212 9362754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00587 595 831 Calmodulin-binding Proteins AT2G36910 27.843 2.47e-21 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00587 - - gmx:100801762 2620.11