Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00585 ATGGAGGAGGATGAGATTCAAGCACAGGCAGCATGTAAGTTCCCTAGAGTTGGAAATGGTAGGAGTGACCAATACCAAGAGGAGGAAGAAGAGGGAGACCTAGTAAGAAGAAGAGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAAGTGATGCTAGCACAAACCATTTCCAAAGTAGTTGGCACCACTCTTCTAGAATCGTAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAGGTGATGACCTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTCTCTGTGAACACAGCTATTCAGTTCTATGACCTTCAAGATCGCTTGGGCTATGACCAACCTAGTAAAGCTGTGGAGTGGTTAATCAAAGCTGCTTCAGAAGCTATCTCTGAGCTTCCTTCTCTCAACAACCCTTTCCCTGATACCCCTAAGCAGCCAAGTGATGAGAAAAGGCCAACTAGTGGTCAACGTGGTGGTCAACCACAACAAGGCTTTGATGATGCAGATGGAGACACCAGTTACCACCAAAACCAAAGCCAGAACCTCTCTCTCTCCAAGTCTGCTTGCAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGTGTCAAGGCAAGGGAGAGGGCAAGGGAGAGAGCATCAAAAGAGAAGGAGAAAGTGAAGGACAAGGAGAAAGAGAAAGAGAGTGAGTCTGGCATTGCACATCACCACCACCACCACCACCACCACCACAATGTGAACAACCCCAACCACATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACAGTAACAGTCAACCCCACAACAACAACAAGTCCTAATGGATCATCAGTTCATCAGATCCATGATGGTGGTGATCATGAGGGTAGTCTATTCCACAAGGGAAGGCAGCAACAACAACAACAACATTGGTCTCCAACAGTGACACCTATGGACTACTTCAGCTCAGGCCTCTTGGTAGGACCTTCTTCATCATCTGCAAGAACTCAACACCAATCTTCTTCAGGACAGTTCCAACTGGGACATGCCCTTCCCATCTCACCATTCAGTGGAGAAAACCACTCAGACCAGCTGCAGCATTTTTCCTTCATGCCAGACCACCTCAACATGCCAGCTGTGGTTACCTCTTCTTCTTCTGCTTCTCAACCCAGCGGGGGTGACAACTACAACCTCAACTTCAGCATCTCCTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCGTTTTTGCCTCACCTCCAGAGGTTTCAACCTTTAGACGGATCATCCAATCTTCCTTTCTTTATAGGAGCTCCTGCTCCTCCAACCATGGACAACAACAATAACAACAACAACAACAGCAACCATCACCACCTTCAGTTCTCACCTGTCTTCGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCATTCTGACCACAAGGGGAAAGGCAAGAACTAA 1518 0.4921 MEEDEIQAQAACKFPRVGNGRSDQYQEEEEEGDLVRRRGGGGGGGGGGGSDASTNHFQSSWHHSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNNPFPDTPKQPSDEKRPTSGQRGGQPQQGFDDADGDTSYHQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERASKEKEKVKDKEKEKESESGIAHHHHHHHHHHNVNNPNHMSHTASFTELLTGGIGSTVTVNPTTTTSPNGSSVHQIHDGGDHEGSLFHKGRQQQQQQHWSPTVTPMDYFSSGLLVGPSSSSARTQHQSSSGQFQLGHALPISPFSGENHSDQLQHFSFMPDHLNMPAVVTSSSSASQPSGGDNYNLNFSISSGLAGYNRGTLQSNSPSFLPHLQRFQPLDGSSNLPFFIGAPAPPTMDNNNNNNNNSNHHHLQFSPVFDGRLQLCYGDGTRHSDHKGKGKN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00585 505 MobiDBLite consensus disorder prediction 211 245 - -
Pumo2g00585 505 ProSiteProfiles R domain profile. 211 229 IPR017888 -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 246 260 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 313 360 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 1 91 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 154 208 - -
Pumo2g00585 505 Pfam TCP family transcription factor 75 230 IPR017887 -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 281 376 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 134 265 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 51 67 - -
Pumo2g00585 505 Coils Coil 215 242 - -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 281 298 - -
Pumo2g00585 505 ProSiteProfiles TCP domain profile. 76 134 IPR017887 -
Pumo2g00585 505 MobiDBLite consensus disorder prediction 22 37 - -
Pumo2g00585 505 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 399 IPR005333 GO:0003700
Pumo2g00585 505 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00585 Pumo-Chr2 9312282 9321020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00585 54 505 TCP Transcription Factor Family AT4G18390 41.189 1.05e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo2g00585 TCP 1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00585 - - gmx:100787772 659.833