Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00574 ATGTTGTTGATTATTTACCTCATAGGTTTCAATAAAGAAAATGCCAAGAGGAAAGAGAAAGGCTATCGTTGCTCATATTGTGAAAGAGTATTTGACAATTATCAAGGTCTTGAAGATCATCAAAAGGTACATGAAGTTGAGTTTAAGCGGCGCGTCAATCAAATCACTCCTTTTCACAATTCAATGGATATCACTAAGTCTATTCTTGAACATGGGAATGTCTCAATGAAAACTTTGTATGGAGGTACAATAACCAATCCTTGTGTAACGAAAGGAAATTGTTATGGTGACAATAGCCAAGAAGACCGCAATTCATTGTTCATGCCTCCAAATTATTCTTCTACAAGAACCAACAATGCATCCTTGGTAGCGTCAATTCAAACTAAAGGGACCATTCCTTTTTCTCAATCTGTGGACCATTCAATTCCTTTTCACAATTCAACGGATATCGCTAAGTCCATTCCTGAACATGAGAATGTCTCAATGAAAACTTTGTATAGAGGTACAATAACCCATCCTTGTGTAACGAAAGGAAAATTTTATGGTGACAATAGCCAAGAAGACCACAATTCATTGTTCATGCCTCCAAATTATTATTCTACAAGAACCATCAATCCATCCTTGGTAACGTCAATTCAAACTAAAGGGACCATTCCTTTTTCTCAATCTGTGGACCATCCAAGTTATATGGGTTTCTTTAATAATCATATTGGTCATGCACCGGGTGCAAGTTCTACTATAAGTCATCAATTTGATGCTAGTAATCCACAGTTTTTTATTGATGGTTTTCCCAAACCTTTTAGAAGCAATTTTCAAAATATCGGACATAATGATAACAACCTTCCATATCCCATCTTTGTTAGAAATCCTTTTTTACCAGATTATCGCATGACTGAATTTGGTTTATCCAAATTTTCTAGCTCGATTGAGCCTAGTTTTGTTGATACCCAAACATATTCTGTTAGCTCAAACAATATTGACCAAATTTCTGAGAGAGGAAAAAAACACAATAGAGATGAAGTCCAAGAAAAAATTTCAATGATAAATCCACCCAAAAGGCCCAATGTCAACCCTAGTCCAATTGTCTATAATGAAAGAGAGATGCTGCAAAAGAAGGAAGCACTTTTTTTTACCAAAGATGCAAAGCCTGAAGCTATAGATGCAATTGTCTTCAAGGATGAAGGAAAGAATGGTTCTACTTTAGAGAGCACAAGTCATGCAAAAGAACAAAAAGAGGCTGATTTGGATCTTTCCCTTCGTCTATAA 1266 0.357 MLLIIYLIGFNKENAKRKEKGYRCSYCERVFDNYQGLEDHQKVHEVEFKRRVNQITPFHNSMDITKSILEHGNVSMKTLYGGTITNPCVTKGNCYGDNSQEDRNSLFMPPNYSSTRTNNASLVASIQTKGTIPFSQSVDHSIPFHNSTDIAKSIPEHENVSMKTLYRGTITHPCVTKGKFYGDNSQEDHNSLFMPPNYYSTRTINPSLVTSIQTKGTIPFSQSVDHPSYMGFFNNHIGHAPGASSTISHQFDASNPQFFIDGFPKPFRSNFQNIGHNDNNLPYPIFVRNPFLPDYRMTEFGLSKFSSSIEPSFVDTQTYSVSSNNIDQISERGKKHNRDEVQEKISMINPPKRPNVNPSPIVYNEREMLQKKEALFFTKDAKPEAIDAIVFKDEGKNGSTLESTSHAKEQKEADLDLSLRL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00574 421 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Pumo2g00574 421 MobiDBLite consensus disorder prediction 392 421 - -
Pumo2g00574 421 MobiDBLite consensus disorder prediction 405 421 - -
Pumo2g00574 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Pumo2g00574 421 SUPERFAMILY beta-beta-alpha zinc fingers 18 47 IPR036236 -
Pumo2g00574 421 Gene3D Classic Zinc Finger 7 77 - -
Pumo2g00574 421 SMART c2h2final6 22 44 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00574 Pumo-Chr2 9176746 9178924 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pumo2g00574 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00574 - - gmx:102668744 476.478